Lates calcarifer (barramundi perch): 108872468 Help Entry 108872468         CDS       T04895                                  Name (RefSeq) 5'-3' exoribonuclease 2   KO K12619   5'-3' exoribonuclease 2 [EC:3.1.13.-] Organism lcf  Lates calcarifer (barramundi perch) Pathway lcf03008   Ribosome biogenesis in eukaryotes lcf03018   RNA degradation Brite KEGG Orthology (KO) [BR:lcf00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     108872468   09123 Folding, sorting and degradation    03018 RNA degradation     108872468  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:lcf03021]     108872468    03019 Messenger RNA biogenesis [BR:lcf03019]     108872468    03009 Ribosome biogenesis [BR:lcf03009]     108872468    03016 Transfer RNA biogenesis [BR:lcf03016]     108872468 Transcription machinery [BR:lcf03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      108872468 Messenger RNA biogenesis [BR:lcf03019]  Eukaryotic type   mRNA degradation factors    5'-3' decay     5' exonucleases      108872468 Ribosome biogenesis [BR:lcf03009]  Eukaryotic type   Pre-60S particles    RNases     108872468 Transfer RNA biogenesis [BR:lcf03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     108872468 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  XRN_M XRN_N DJC28_CD zf-CCHC Motif Other DBs NCBI-GeneID:  108872468 NCBI-ProteinID:  XP_018515666 UniProt:  A0A4W6FRX4 LinkDB All DBs Position LG7_1:1991750..2024569 Genome browser AA seq 980 aa AA seqDB search MGVPAFFRWLSRKYPSIIVHCVEEKGKECNGVRIPVDTTKPNPNEVEFDNLYLDMNGIIH PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRFR ASKEGVELVEEKNRMREEIIQRGGYLPPEEIKERFDSNCITPGTEFMDNLAHCLRYYVAD RLSNDPGWRNVTVFLSDASVPGEGEHKIMDFVRRQRAQPNHDPNTHHCLCGADADLIMLG LATHEPNFTIIREEFKPNKPRPCALCGQMGHEIKDCQGTAREKQGQHDEFADTMPAAEQE FIFIRLCVLREYLARELTMASLPFPFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAI DRLVNIYKDVVHKTGGYLTQNGYVNLERVEMIMQAVGVAEDNIFKKRKEDDESFKRRMKE KRKRMKAEQQGPAYLTTGQFAPHALGRRDRPEPVQNARHQAYDMRMQSREQHNKDAAQSL KAMIRNGGNSSAGPSDSSDSRGVKRKAEDSDSEPEPEDNVRLWEEGWKQRYYKTKFDVEV TDEDFRKKVVKSYVEGLCWVLRYYYQGCASWKWYFPFHYAPFASDFKDIKDMFTEFEKET KPFKPLEQLMGVFPAASGNFLPQTWRNLMTSPVSSIIDFYPDDFAIDLNGKKYAWQGVAL LPFVDERRLRAALADVYPDLTPEEVKRNSLGSDIMFVGKSHPLSDFIHELYRAETQEGTE IPVELCHGIQGTLNLDDDPILPDKPVRSPIPMLRDISQNSAIGVKFKDPHYADGFVFKAV LLPGAKIPNKVLKPGDWEKGNREPWRPQLGFNPNRQQAHLDQSGFRALGHSLNRNQHGGG QYSNTPPPSNYQHGNYRPPHSGGHQPFPHSRQNSLLGAPPSFHQPQYPRQQQQYGRGGHG WDRTMQSQQSAYQQNMSRGRGGGGGGGGGGGGYQQRYDHRRDDWHDRRDDRRDNRGQQHQ GYSSGRGYPPPPPSRRYNWN NT seq 2943 nt NT seq  +upstreamnt  +downstreamnt atgggagtcccggcgtttttccgttggcttagccgaaaatatccgtcaatcattgtgcac tgtgtggaggagaagggcaaagaatgtaatggagttcgtatccctgtcgacacaaccaag ccgaacccaaatgaggtggaatttgacaatttgtatctggacatgaatgggatcattcac ccatgtacacatccagaggataaaccagctcccaaaaatgaagatgagatgatggtcgcc attttcgagtacattgaccgcctgtttaatatcgtgcggcccaggagagttctctacatg gccatcgatggagtggctcctcgggccaaaatgaaccagcagcgctctcggcgttttcgt gcctccaaagaaggcgtggagctggtggaggagaaaaatcgcatgagggaggagatcatc cagagaggaggttatcttccacctgaggagattaaggagaggttcgacagcaactgcatc actccaggaacagagttcatggacaacctggcacattgtcttcgatactatgtcgcagac agactcagcaatgacccaggatggaggaatgtcactgtgttcttgtctgatgccagcgtt ccaggtgaaggtgaacacaagattatggactttgtcaggagacaaagagctcaacccaac cacgaccccaacacccatcactgcctgtgtggagctgatgctgacctgatcatgctgggc ctggccacacacgagccgaacttcaccatcatcagagaggagtttaaacccaacaaaccg cggccctgcgcgctctgcggacagatgggtcacgaaatcaaagactgtcaggggacggcc agagagaagcagggacagcacgatgagtttgcagacacgatgccggcggctgagcaggag ttcatattcatcagactgtgtgtgctgcgggagtacctcgcgagagagctgaccatggcc agcctgccctttcccttcgactttgagaggagcgtcgacgactgggttttcatgtgcttc tttgttggaaatgacttcctacctcatctgccgtccttagaaatcagagagggagccata gatcgactggtcaacatctacaaagatgtcgtgcacaaaaccggaggctacctgacgcag aacggctacgtcaacctggagcgggtcgagatgatcatgcaggccgtgggcgtggccgag gacaacatcttcaagaagcgcaaagaggacgatgaaagcttcaagagacgaatgaaagag aaacgaaaaaggatgaaggcagagcagcagggtccggcctacctgaccacaggccagttc gcccctcacgccctggggagaagagaccgacctgaacccgtccaaaacgcccggcaccag gcctacgacatgaggatgcagtccagggagcaacacaacaaggatgctgctcagtctctg aaagccatgatcaggaacggaggcaattcgtctgcaggacccagcgacagctccgacagc aggggggtgaagaggaaagccgaggacagcgacagcgaaccggagcctgaagataacgtc aggttgtgggaggagggctggaagcagagatactacaagaccaagtttgacgtggaagtg acggatgaagatttcaggaagaaggtggtgaagtcgtatgtggagggcctgtgctgggtg ctgcgctactattaccagggctgcgcctcctggaagtggtacttcccgttccactacgcc ccgttcgcctccgacttcaaagacatcaaagacatgttcacagagtttgagaaggagacc aaaccatttaagcccctggagcagctgatgggagtgtttcctgctgccagcggtaacttc ctgccccagacgtggcggaacctcatgaccagcccggtttcttccatcattgacttctac cccgacgactttgcaattgatctcaacggcaagaaatacgcttggcaaggtgtggccttg ttgccttttgtggatgaacgtcggttgagggcggcgctggctgacgtctaccccgacctc acacctgaggaagtgaagagaaacagcctgggcagcgacatcatgtttgttggcaaatct cacccgctgtccgacttcatccatgaactttaccgtgcagagactcaagagggcactgag atccctgtagagctgtgccatggaatccaaggtacattaaatcttgatgacgaccctatt ctaccagataagccggtgaggtcgcccatcccgatgctgcgtgacatttcacagaacagt gcgatcggagtgaagttcaaggatccccactatgcagatggctttgtgttcaaggcggtc cttctacctggagccaagattcctaacaaggtcctgaaaccaggtgactgggagaaaggg aacagggaaccgtggagacctcagctgggcttcaacccaaacaggcagcaggctcacctg gaccagtctggcttcagggctctgggtcacagtctgaacagaaaccagcacggaggagga cagtacagcaacacgccaccgccgagcaactaccagcatggaaactaccgtcctccacac agcggcggacaccagcctttcccacattccaggcagaacagtttgctgggagcgcctccc tccttccaccagccccagtatccaaggcagcagcagcagtatggacgtggaggtcacggc tgggatcggaccatgcagtcgcagcagtcagcgtaccagcagaacatgagccgtggccga ggaggaggaggaggaggaggaggaggaggaggcggctaccagcagcgctacgatcaccgt agagacgactggcacgatcgcagggacgatcgcagagacaaccgggggcaacagcatcag ggctacagctccggcagaggttaccctcctcctcctccctccaggagatacaactggaac taa

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