Lates calcarifer (barramundi perch): 108872471
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Entry
108872471 CDS
T04895
Name
(RefSeq) hepatocyte nuclear factor 3-beta
KO
K08035
forkhead box protein A2, hepatocyte nuclear factor 3-beta
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108872471
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix developmental regulators
108872471
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Gene cluster
GFIT
Motif
Pfam:
Forkhead
HNF_C
Forkhead_N
Motif
Other DBs
NCBI-GeneID:
108872471
NCBI-ProteinID:
XP_018515669
UniProt:
A0AAJ7L8M7
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Position
LG7_1:complement(2078257..2081759)
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AA seq
390 aa
AA seq
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MLSAFKMEGHEHPDWSSGGGYYGETECYTNMNMSSYMNAPGMTGSGHMNAPYVNPVGVSS
HSSVPGGMSQSPGAGAGMTPGLGAISPPPPPPPPYGTVPVMSPVYGQPCGIKPKPYRRSY
THAKPPYSYISLITMAIQQSGTKMLTLNEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFND
CFIKVPRSPDKPGKGSFWALHPDSGNMFENGCYLRRQKRFKCAGKKPGTGEKEAAGKPPR
GSEGGSGSDSPHSSSSSSSPASEVKGAGVDLNLNLKPHLQSSPVRVPSPLTHTQHLFSHH
HHHPLLLHDHLKPDHYPHPHPHYSFNHPFSINNLMSEPQHHRLEPVVQYGGYGCPVPAGT
LVAAKTGLDPAHTDTNYYHGVYGRPIMNST
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcgcgtttaagatggagggacacgagcatccggactggagcagcggcggcggg
tactacggagagaccgagtgttacacaaacatgaacatgagcagctacatgaacgcgcct
ggcatgacgggctcgggccacatgaacgcgccttacgtgaacccggtcggggtcagcagc
cactcctcggtgcccggcgggatgtcgcagagccccggggccggggccgggatgactccg
ggcctgggcgccatcagcccgcctccgccgccgccgccgccgtacgggaccgtgccggtg
atgagcccggtgtacggtcagccctgcggcatcaaacccaaaccgtaccggcgcagctac
acgcacgccaagccgccgtactcctacatctccctgatcaccatggcgatccagcagtcc
gggaccaagatgctgactctaaacgagatctaccagtggatcatggatctgttcccgttt
taccggcagaaccagcagcggtggcagaactccatccggcactcgctctcctttaacgac
tgcttcatcaaggtcccgcgctcaccggacaaaccggggaaaggctccttctgggccctg
cacccggactcggggaacatgtttgagaacggctgctacctgcggcggcagaagcgcttc
aagtgcgcggggaagaagcccggtaccggagagaaggaggcggcggggaagcctccgcgc
ggctcggagggcggctccggctcagactccccgcactcctcctcctcctcctcctctccg
gcctcagaggtgaagggggccggggtggacctgaacctgaacctgaaaccacaccttcag
tccagcccggtgcgcgtgccctctccgctcacgcacacccagcacctgttctcccaccac
caccaccacccgctgctgctgcacgaccacctgaagccagaccactacccgcacccgcac
ccgcactactccttcaaccacccgttctccatcaacaacctcatgtccgagccgcagcac
cacaggctcgagcccgtggtgcagtacggaggctacggctgcccggtgcccgccgggacc
ctggtggccgccaaaaccggcctggatccggctcacaccgacaccaactactaccacggc
gtgtacggcaggcccatcatgaactccacatga
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