Lates calcarifer (barramundi perch): 108872477
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Entry
108872477 CDS
T04895
Name
(RefSeq) synaptonemal complex protein 3
KO
K19528
synaptonemal complex protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108872477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108872477
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108872477
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Meiosis-specific proteins
Synaptonemal complex
108872477
Cilium and associated proteins [BR:
lcf03037
]
Motile cilia and associated proteins
Sperm associated proteins
108872477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cor1
Peptidase_C65
UDPG_MGDP_dh
Spectrin_3
FUSC
CENP-T_C
Motif
Other DBs
NCBI-GeneID:
108872477
NCBI-ProteinID:
XP_018515673
UniProt:
A0A4W6BKB2
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Position
LG10:647555..650676
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AA seq
246 aa
AA seq
DB search
MPTNQTGRMATGRKQMKKKYPEEKPDKNVFDFPEDEKKELSGSEDDVREDETPMVDKVAK
KRPAADFEVEETTCAVGNEVQTMLKKFGADINKVMQAKKKRLESLTKNYMTGSQSRLEQL
WNNYHSQRQKMTQQYSQQVSTALQQWETEAQRAEEQEEKLTSLFRQQQKILQQARVVQNQ
KLKTVRELYEQFVKNMEEMEKSHEAFVQGAQQELRKEMSVLQKKILMDTQQREMATVRKS
LQSMLF
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaaaccagacaggaagaatggcaacaggtagaaaacagatgaagaaaaaatac
ccagaggaaaaaccagataaaaacgtttttgattttcctgaagatgagaagaaagagctg
agtggttcagaggacgatgttagagaagatgaaactccgatggtggataaagtggcaaag
aagagacctgcagctgattttgaggtggaggagacaacctgcgctgtcgggaacgaggta
cagaccatgctgaagaaatttggagctgacatcaacaaggtgatgcaggcgaagaagaaa
cgtctggagtctctgacaaagaactacatgacaggaagtcagagcagactggagcagctg
tggaacaactaccacagccagaggcagaagatgactcagcagtactctcagcaggtgtcc
acagcgctgcagcagtgggagactgaagctcagagagccgaggagcaggaggagaaactc
actagtctgttcagacagcagcagaagatcctgcagcaggccagagtcgtacagaaccag
aagctgaagacggtcagagagctgtacgagcagtttgtcaagaacatggaggagatggag
aagagtcatgaggcgttcgtccagggagcgcagcaggagctgaggaaggagatgtccgtc
ctgcagaagaagatcctcatggacacgcaacagcgggagatggccaccgtccgcaagtct
ctgcagtccatgctgttctaa
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integrated database retrieval system