Lates calcarifer (barramundi perch): 108872574
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Entry
108872574 CDS
T04895
Symbol
tgfb5
Name
(RefSeq) transforming growth factor beta-2 proprotein
KO
K13376
transforming growth factor beta-2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04060
Cytokine-cytokine receptor interaction
lcf04068
FoxO signaling pathway
lcf04110
Cell cycle
lcf04218
Cellular senescence
lcf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108872574 (tgfb5)
04350 TGF-beta signaling pathway
108872574 (tgfb5)
04068 FoxO signaling pathway
108872574 (tgfb5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108872574 (tgfb5)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108872574 (tgfb5)
04218 Cellular senescence
108872574 (tgfb5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108872574 (tgfb5)
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108872574 (tgfb5)
Cytokines and neuropeptides [BR:
lcf04052
]
Cytokines
Transforming growth factors (RSTK binding)
108872574 (tgfb5)
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Heparan sulfate / Heparin
Growth factors/receptors
108872574 (tgfb5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
CBM96
Motif
Other DBs
NCBI-GeneID:
108872574
NCBI-ProteinID:
XP_018515861
UniProt:
A0A4W6EXZ4
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Position
LG8:14832649..14844571
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AA seq
420 aa
AA seq
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MWLPRLALLLLLRFSGVLLVEGLNTCQSINLDAQKSRRIEAVRGQILSKLRIRSPPDEDD
EATPPGSVPPEVILLYNSTRELLKERARLAESACERESSEEDYYAKEVQRIDMLPPRTDT
NAVQPAAPNPHYRVVHFDVSGVDLTNSTLVKAEFRIFRAPNPQARASEQRVEIYQLLKPD
EESTSTQRYIDSRTVQPKAKGSWISVDVTETIKDWVSDPENNLGLKLGVHCPCCTFVPST
NNIVPNKSEELEALFAGVDDEQLRQIRKPGQVKGQADFSTKTPHLILTLLPSDRVDNPAK
KNRKKRAAATDTTTCSRGSDQGCCLRSLYIDFRRDLNWKWIHEPKGYKANFCAGNCPYLW
SANNHYNMILPLYNKLNPEASASPCCVPQDLEPLTIMYFIGRTPRVEQLSNMVVKSCKCR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtggctcccccgcctcgcgctgctgctgctgctccggttctccggtgtgttgctggtg
gaggggctcaacacgtgccagtccatcaacctggacgcgcagaagtcccggcgcatcgag
gcggtccgcgggcagatcctcagcaagctccgcatccgcagcccgccggacgaggacgac
gaggccacgccgcctggctccgtgcccccggaggtcatcctgctgtacaacagcacgcgg
gagctgctgaaggagcgcgcgcgtctggccgagtccgcctgcgagcgcgagagcagcgag
gaggattattacgccaaagaggtgcagaggattgacatgctgcccccccgcaccgacaca
aacgcggtgcagccagcagcacccaacccccactacagagtcgtccatttcgacgtcagc
ggagtcgacctgaccaacagcaccctggtcaaggccgagttcaggatcttcagggctccc
aacccgcaggcccgggcctcagagcagagagtggagatctatcagctgctgaagccagat
gaagagagcacctccactcaacgttacatcgactcccgcaccgttcagcccaaggcgaag
ggatcctggatctcagtggatgtcacagaaaccatcaaggactgggtgtctgatccagag
aataatctcggcctgaagctgggcgtccactgtccctgctgcaccttcgtcccgtccacc
aacaacatcgttcccaacaagagcgaggagctggaggccctgtttgcaggtgtggatgac
gagcagcttcgtcagataagaaagcccggtcaggttaaaggccaggcggatttcagcacc
aagacgccgcacctcatcctcaccctgctgcccagtgacagagtcgacaacccggccaag
aagaaccgcaagaagagggcggcagccacagacaccacaacctgctcccgcggctcggac
cagggctgctgcctgcgctcgctctacatcgacttcaggcgtgacctcaactggaagtgg
atccatgagcccaaaggttacaaagctaacttctgtgctggaaactgcccttacctctgg
agtgccaacaaccactacaacatgatcctgcccctgtacaacaagctgaaccctgaggcc
tccgcctcgccctgctgcgttcctcaggacctggagcccctcaccatcatgtacttcata
ggccgcacaccacgcgttgagcaactctccaacatggtcgtcaaatcctgcaagtgccgc
tga
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