Lates calcarifer (barramundi perch): 108872667
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Entry
108872667 CDS
T04895
Symbol
nfatc3b
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 3
KO
K17333
nuclear factor of activated T-cells, cytoplasmic 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04020
Calcium signaling pathway
lcf04148
Efferocytosis
lcf04218
Cellular senescence
lcf04310
Wnt signaling pathway
lcf04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108872667 (nfatc3b)
04310 Wnt signaling pathway
108872667 (nfatc3b)
04020 Calcium signaling pathway
108872667 (nfatc3b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108872667 (nfatc3b)
09143 Cell growth and death
04218 Cellular senescence
108872667 (nfatc3b)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
108872667 (nfatc3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108872667 (nfatc3b)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
108872667 (nfatc3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
TIG
Motif
Other DBs
NCBI-GeneID:
108872667
NCBI-ProteinID:
XP_018515989
UniProt:
A0AAJ7L7P3
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All DBs
Position
LG10:1842450..1860756
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AA seq
945 aa
AA seq
DB search
MSAVNCAEELDFRLIFEEDGRQTAGPDLNVRTPPSSAQALAEQPISHELQGHPPYFSTID
SYQHVGCHSQGPQYATLGNPRAFDCPSIQITSIAPNNHVEPGAGQEALAVGGAEGGYPEV
SWSRDQLYLPLDPCYRDPALCPSPCSSMSSRSWMSDLSSCESFSHVYDDVEELCDDARLA
LGSPLGSPLGSPGCGGGAFGVELWQQKYQHPLAFSPALSPHQSPRQSPRQSPRQSPRQSP
CHSPRTSVTEESWLNRRPTSRPSSRPTSPCGKRRHSSADPHARSPSPHHSPSPTPSASPR
GSVTDDTWVGSPAAGAIGTLLMAGYQELDVPSKTRRTSGSQLGLLPGQGDPGLDAFQDSP
GEDGREQGGLAELFLQVPSHFSWNKPKPGNPPLFRTSSPPPLDWLLPSQFDQCELKLEVQ
PKSYHRAHYETEGSRGSIKAATGGHPVVKLSGYSEQPISLLLFIGTADDRYLRPHSFYQV
HRVTGKTVTTTCQEKIMGGTKVLEIPLLPENNMSASIDCAGILKLRNADIELKKGETDIG
RKNTRVRVVFRVAIPQSDGRMLWLQTASIPVECSQRSGQELPQVESFSPASCSVDGGEEL
LITGSNISTQSRVVFMEKTSDGRSLWEMDARVVLEKSSGSSIVVEVPPYSKKTAGPVQVQ
FYVSNGKRRRSLTQSFTFLPAVRHHLPPAPPPPPAAAAQLVKQEHWELDHISHNPPGFSP
DVGYYDSCDLTVHCGPPSQNAPHLHHPPPPSSLPLQASLMYPHPPSSSSPSMPSQTSHHS
LIPLQTSIMPPQTFTIPPQISTLAPQASSIPLQTFTIPPQTSSSSSSSLPPRTSPVAPQR
EQPPSLSSSRPFADPQKDSLLSSPEEVLNIKQEPEDQPNLASLGLREITLDDVNEIIDRD
IGSLSGGAQPDQFDQFHQYDWEHKSDTAATTAAGAALPFPGGGPQ
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagtaaactgcgctgaagagctggacttcagactaatctttgaggaggacggc
agacagacagcaggtccagatctcaatgtgaggacacctccctcctccgctcaggctctg
gccgagcagcccatcagccatgagctgcagggtcacccgccatatttctccaccatagac
agctaccagcatgtcggctgccactcccagggtccccagtacgccaccctggggaacccc
agagccttcgactgcccgagcatccagatcacctccatagctcccaacaaccatgtggag
cccggtgccggtcaggaagctttggcagtgggtggcgcagaggggggctaccccgaggtg
tcctggtctagagaccagctgtacctgcccctggacccctgctaccgggacccggcgctc
tgcccgagcccctgcagcagcatgtcgtccaggagctggatgtccgacctctcctcctgc
gagtccttctcccacgtttacgatgatgtggaggagttgtgcgacgacgcccgccttgcc
ctgggctccccccttgggtctcctctggggtccccgggctgtgggggcggggccttcggg
gtggagttatggcaacagaagtaccagcatcctctagccttcagcccggcgctgtcgcct
catcagtcgccccgtcagtcgcctcgtcagtcgccccgtcagtcgccccgtcagtcgccc
tgccactcccctcgcaccagtgtcacagaggagagctggctgaaccgccgccccacctcc
aggccatcgtctaggccgacctccccctgcggaaagagacgccattccagtgccgacccc
cacgcccgctcgccctcccctcaccactcaccaagccccacgccgagcgcctccccgcgg
ggcagcgtcacagatgacacctgggtaggaagccctgccgctggtgccattgggaccctc
ctgatggccggataccaggagctggacgtaccctccaagaccaggaggacgtcagggagc
cagctgggcctcctccctgggcagggagaccccgggctggacgccttccaggattctccc
ggggaggacggacgcgaacagggcggcctggctgagctctttcttcaggtgccctcccac
ttcagctggaacaaacccaaacctggaaaccctcctctgttcaggacctcgtctcctcct
cccttggactggcttctgcccagccagtttgaccagtgtgagctgaagctggaggtccag
cccaagtcctaccacagggcccattatgagacggagggcagcagagggtccattaaagca
gcaacaggaggacaccctgttgtgaagttgagtggatacagcgagcagccgatcagcctg
ctgctgttcatcggcaccgcagacgaccgctaccttcgccctcattccttctaccaagtc
caccgggtgacggggaagacggtcaccaccacctgccaggagaagattatgggtggcacc
aaagtcctggagatccctctgctgccagaaaacaacatgtccgccagcattgactgtgcc
ggcatcctgaagctgcgcaacgccgacatcgagctgaagaaaggggagacggacattgga
cggaaaaacacaagggtgcgagttgtgttcagggtcgccatccctcagtcagacggccgg
atgctgtggctgcagacggcatctattcctgtggagtgctcccagcgctccggccaggag
cttccccaggtggagagcttcagcccggccagctgctccgtggacggaggagaggagctg
ctcatcaccggatccaacatctccacacagtccagggtcgttttcatggagaaaacatcc
gatggaagatcactgtgggaaatggatgccagagttgtgctggaaaaaagcagcggatcc
agcatcgtggtggaggttcctccgtacagtaagaagacagcaggtccggttcaggtccag
ttctacgtctcaaatgggaagagaagaagaagtctgacgcagagcttcaccttcctgcct
gcagtcagacatcacctccctcctgctcctcctcctcctcctgctgctgcagctcagctg
gtcaaacaggagcactgggagctggaccacatctcccacaatccacctggattcagcccc
gatgtgggttattacgattcctgtgacctcacagtgcattgtggtcctccctcccagaat
gcacctcatctccatcatcctcctcctccctcctccctcccccttcaagcttccttaatg
tatcctcaccccccctcctcctcctccccctccatgccgtctcagacctcccatcactcc
ctgattcctcttcagacctccatcatgcctccacagaccttcaccatcccgcctcagatc
tccacgttggcgccccaggcctcctccatcccccttcagaccttcaccatccccccacag
acctcctcttcctcctcctcctcgctgcctcccaggacctcccctgttgcccctcagagg
gagcagcctccttccttgagctccagcagacccttcgccgacccccagaaggactctctc
ctctccagccctgaggaggtgctgaatatcaagcaggagccggaggaccagccgaatctg
gcgtctctgggccttcgggagatcacactggatgatgtgaacgagatcatcgacagagac
atcggcagtctgagcggcggcgcccagcccgaccagtttgaccagtttcaccagtatgac
tgggagcacaagtccgacactgccgccaccaccgccgccggtgccgccttaccgttcccc
ggaggtggccctcagtag
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