KEGG   Lates calcarifer (barramundi perch): 108872671
Entry
108872671         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: AFG3-like protein 1
  KO
K08956  AFG3 family protein [EC:3.4.24.-]
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lcf01002]
    108872671
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:lcf03110]
    108872671
Peptidases and inhibitors [BR:lcf01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   108872671
Chaperones and folding catalysts [BR:lcf03110]
 Other chaperones and cochaperones
  AAA proteases
   108872671
SSDB
Motif
Pfam: Peptidase_M41 AAA AAA_lid_3 FtsH_ext AAA_5 AAA_22 AAA_16 TIP49 RuvB_N AAA_2 AAA_14 AAA_28 AAA_17 nSTAND3 IstB_IS21 ThcOx
Other DBs
NCBI-GeneID: 108872671
NCBI-ProteinID: XP_018515995
UniProt: A0AAJ7L7K5
LinkDB
Position
LG10:complement(1608853..1619776)
AA seq 770 aa
MSQVLRLLSAAALPLCRAAGLRARLCAVTAGRLFTAGYGSSAAPNVCRTPANFLSCRRFQ
TAQRRLYSTEPKDGGGGGGGRPGGGKRGGGGGKDWWSRLQKGDFPWDEKDFRYIMITVAG
VSSALLYFYTRDNGKEITWKDFVHRYLGRDLVERLEVINKQYVRVILVPGADTDTSYVWF
NIGSVDTFERNLEAAHAELQLEPSHRATVVYSMESDGSFLVNMLPTLLLIGFLVFSLRRG
PMGGGVGGGRGGPFSMSESTAKMMKDSIDVKFKDVAGCEEAKLEILEFVNFLKNPQQYQD
LGAKIPKGAVLSGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAM
ARKNAPCILFIDEIDAVGRKRGGGNFGGQSEQENTLNQLLVEMDGFNTATNVVVLAGTNR
PDILDPALMRPGRFDRQIYIGPPDIKGRASIFKVHLRPIKLDPNLDKDALARKMAAATPG
FTGADIANVCNEAALIAARHLYPAVNAKHFEQAIDRVIGGLEKKTQVLQPTEKKTVAYHE
AGHAIVGWFLQHADPLLKVSIIPRGKGLGYAQYLPREQYLYSREQLFDRMCMMLGGRVAE
QVFFGRITTGAQDDLKKVTQSAYAQVVQFGMSEKVGQVSFDLPRQGEMVLEKPYSEATAE
LIDEEVREMVDRAYERTLQLIQEKKDLVEKVGKRLLEKEVLVKADMVELLGPRPFEEKST
YEEFVEGTGSFEEDTSLPEGLRDWNQERGGGEGEAEAEETSPAQDKQKAA
NT seq 2313 nt   +upstreamnt  +downstreamnt
atgtctcaggtgctgaggcttctctcggcggccgctctgcctctctgccgggctgcagga
ctccgggctcggctctgcgcggtgacggcaggacggctctttacagccggatacgggagc
tccgctgccccgaacgtctgtcggactccagctaacttcctgtcctgtcgcaggttccag
acagctcagcgacgactttactccactgaacctaaagatggaggaggaggaggaggagga
agaccaggaggagggaagagaggaggaggaggaggaaaagactggtggagccgactgcag
aagggcgacttcccctgggatgagaaggatttccgttacataatgatcaccgtggccgga
gtcagctcagctctgctctacttctacaccagagacaacggcaaagagatcacctggaag
gactttgtccaccggtacctgggcagagacctggtggagcggctggaggtcatcaacaaa
cagtacgtcagagtcatcctggtgccgggagctgacaccgacacgagctacgtttggttc
aacatcggcagcgtcgacacgttcgagaggaacctggaggcggcgcacgcagagctccaa
ctggagccgtcgcaccgagccaccgtcgtctacagcatggagagcgacggttcctttctg
gtgaacatgctccccacgctgctgctgattggcttcctggtcttcagcctgcgacgcgga
ccaatgggaggaggtgtcggcggcggcaggggcgggcccttcagcatgagcgagtcgacg
gccaaaatgatgaaggacagcatcgacgtgaagttcaaggacgtggccggctgcgaagag
gccaaactggagatcctggagttcgtcaacttcctgaagaacccgcagcagtaccaggac
ctcggagccaagatccccaagggtgccgtgctgtccggtcctcccgggacagggaagact
ctgctggctaaagccacggctggagaggccaacgtccccttcatcaccgtcaacggctcc
gagttcctggagatgtttgtgggcgtcggaccggccagggtgagggacatgttcgccatg
gcgaggaagaacgccccctgcatcctcttcatcgatgagatcgacgccgtggggaggaag
agaggcggagggaactttggtggtcagagcgaacaggagaacacgctgaaccagctgctg
gtggagatggacggttttaacacagctacgaacgtcgtggtcctggctggaaccaacaga
cctgacatcctggatcctgccctgatgagaccgggacgcttcgacagacagatttacata
ggtcctccggacatcaagggcagggcgtccatctttaaagtccaccttcgaccgatcaag
ctggacccaaacctggacaaagacgccctcgccaggaagatggcggcagctacaccagga
ttcactggagccgacatcgctaacgtctgcaacgaggcagctctgatcgccgccagacac
ctgtaccccgccgtcaacgccaaacactttgaacaggccatcgaccgtgtcatcggaggt
ctggagaagaagactcaggtcctgcagccgacagagaagaagactgtggcatatcacgag
gccggtcacgccatcgtgggctggttcctgcagcacgccgaccccctgctaaaggtgtcc
atcatcccgcgggggaagggtctgggttacgctcagtacctgcccagagagcagtacctg
tacagcagagagcagctgttcgacaggatgtgcatgatgctgggaggacgcgtggccgag
caggtgttcttcggccggatcaccaccggagctcaggacgatttgaagaaggtcacgcag
tcggcctacgctcaggtggtgcagttcgggatgagcgagaaggtggggcaggtgtcgttc
gacctgccccggcagggcgagatggtcctggagaagccgtacagcgaggccacggcggag
ctgatcgacgaggaggtcagggagatggtggatcgggcgtacgagcgcaccctgcagctc
attcaggagaagaaggacctggtggagaaggtggggaagcggctcctggagaaggaggtc
ctggtgaaggcggacatggtggagctgctgggcccgcggccgtttgaggagaagtcgacg
tacgaggagtttgtggaggggacggggagtttcgaggaggacacgagtctgccggagggt
ctccgagactggaaccaggagagaggaggaggagagggggaggcagaggccgaggagacg
agtccggctcaggacaaacagaaggcggcgtag

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