Lates calcarifer (barramundi perch): 108872685
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Entry
108872685 CDS
T04895
Name
(RefSeq) rhomboid-related protein 4
KO
K09651
rhomboid-related protein 4 [EC:
3.4.21.105
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108872685
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
108872685
Peptidases and inhibitors [BR:
lcf01002
]
Serine peptidases
Family S54: Rhomboid family
108872685
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
UIM_2
Motif
Other DBs
NCBI-GeneID:
108872685
NCBI-ProteinID:
XP_018516016
UniProt:
A0A4W6G054
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Position
LG21:complement(22325159..22332700)
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AA seq
343 aa
AA seq
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MQRGFQLGLLLLAVQLFQEGLGNIPAITLAVLGFNVYLYMFPAAQLMKACMSLQYVYRHK
EWRRLLLSPLHHVDDWHLYFNMVSFLWKGIRLEHRLGAAWFLYLLSVFSLLTGLVYLLLQ
ALMTKLIEDSDSLAELIDMSSLSNECVVGFSGVLFALKVVSNYYNPGGVTYVLNLRVSNR
FASWVELVLIYLIAPGTSLVGHLAGILVGLLYTVGPLKTIMETCAEFVSSEVNTPQPRPY
YSYSGYSRTRRENREDPRHAEDYTTDYTSEYTDSDIAGLTEEEQIELAIRKSLNDRGQTR
PRRASSPPHGYQPTDEDVSPEEILRRRRLRRFDQGFPSQRRRL
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggggtttccagctgggcctgctgcttctggcggtccagctgttccaggagggt
ctgggaaacatccctgccatcaccctggctgtcctgggattcaatgtgtatctttacatg
ttccctgctgctcaactgatgaaggcctgcatgagcctccaatatgtgtacaggcacaag
gagtggcgtcgcctcctcctttcccccctgcaccacgttgacgactggcacctctacttc
aacatggtgtctttcctctggaaaggcatcaggctggagcatcgtctgggtgcagcctgg
ttcctctacctgctgtcagtcttctctctgctcaccggactggtctatctgctgctgcag
gcgctgatgacaaaactcatcgaggactctgattcattggcagaacttatagatatgtcg
tctctcagcaacgagtgtgtcgttggtttctcaggtgtcctgtttgctctgaaggtggtc
agcaactattacaacccaggtggtgtgacctatgtgttgaatctgcgtgtgtccaatcgc
tttgctagctgggtggagctagtgctgatctacctaatcgcccccgggacttctttggtg
ggtcacctggcaggtatcctggtgggtcttctctacactgtgggtccattgaagaccatc
atggagacatgtgcagagtttgtatcttcagaagtaaatactccacagccaagaccatac
tacagctattcaggctacagcagaactaggcgagaaaatcgagaagatccacggcatgca
gaagattatacgacagattatacttctgagtatacagactcagatatcgcaggactgaca
gaggaagagcagatagaactggcgatcagaaaaagcctgaatgacagaggacaaaccaga
ccgagaagagcttcaagtccccctcatggttaccagcccactgatgaggacgtgagtcct
gaagagattctcaggaggaggagactgaggaggtttgaccaaggatttcccagccagagg
agaagattgtaa
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