Lates calcarifer (barramundi perch): 108872693
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Entry
108872693 CDS
T04895
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 17
KO
K15133
mediator of RNA polymerase II transcription subunit 17
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcf03021
]
108872693
Transcription machinery [BR:
lcf03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Head
108872693
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med17
SNaCT6
Motif
Other DBs
NCBI-GeneID:
108872693
NCBI-ProteinID:
XP_018516025
UniProt:
A0A4W6FXX8
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Position
LG21:22180756..22189434
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AA seq
643 aa
AA seq
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MSGGPAVRVSIESSCEKQVQEVALDGTETYVPPLSMSQNLAKLAQRIDFSQGSDSEEDGA
EGEPRDREWGKQEPEEEEGTVKFQPSLWPWDSVRNNLRSALTEMCVLYDVLSVVKEKKYM
ALDPVSQDPTAGKTPQVFQLISKKKSLATAAQLLLKGAEKLTKSVAENQENRRQRDFNSE
LLRLRSQWKLRKVGDKILGDLSYRSAGSLFPHHGTFEVIKNTDIDLDKKIPEDYCPLDVQ
IPSDLEGSAYIKVSIQKQAPDIGDLGTVNLFRRPPKTKAGTQPWHVKLEAAQNVLLCKEI
FAQLSREAVQIKSQIPHIVVKNQIISQPFPGLQLSISLCHSTGEKKNHRTSPEKPKPDDH
LYVLEHNLHQMMREFHKQQLSSVVMPHPASAPFGHKRLRLAGPLAYDKAEISSLQQSEGL
LEKIIKQAKHIFLRSRTARTIDSLASRIEDPQIQAHWSNINDVYESSVKVLITSQGYEQI
CKSIQLQLNIGVEQIRVVHRDGRVITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWH
VLSFSNHVGLGPVESIGNASAVTVASPNGEYAISVRNGPESGCKVLVQFPRSQTKDLPKS
DVIQDTKWSHLRGPNKEVHWSKMEGRNFVYKMELLMAALTPCP
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtggtccagcggtgagggtcagcattgagtcttcctgtgagaagcaggtgcag
gaagtggctctggatgggacagagacatatgtgccccctctgtccatgtcccagaacttg
gcaaagttggcacagagaattgacttcagccagggatctgactcagaggaggatggggct
gaaggcgaacccagggaccgtgagtggggcaagcaggagccagaagaagaagaaggcaca
gtgaagtttcagccttctctttggccctgggactcggtgcgtaacaacctgcgcagtgcc
ctgacggagatgtgcgtactatacgatgtactcagcgtggtgaaggagaagaagtacatg
gccttagacccagtgtctcaggatccaacagctggcaagacgcctcaggtgtttcagttg
atcagtaagaagaaatcattggccacagcagcgcagctcctcctgaagggagcagagaag
ctcactaagtcagtagcggagaaccaggagaacaggaggcaaagagacttcaactctgaa
cttctgcgtctccgctcgcagtggaaactacgaaaagtgggagacaagatcctgggagac
ctcagctaccggagtgcaggttccctttttcctcaccatggcacatttgaagtgatcaag
aacacagacattgatctggacaaaaaaatcccagaggactactgcccccttgatgttcaa
atccccagtgatttggagggatctgcctatataaaggtgtccatccagaaacaagctcca
gacataggtgatctgggaaccgtcaacctgtttaggagaccaccaaaaaccaaagctggt
acccagccatggcatgtgaagctagaggcggctcagaacgttttgctctgtaaggagata
ttcgcccagctgtccagggaagctgtccagattaaatcccaaatccctcacattgtggtg
aagaatcagatcatctcgcagcccttcccaggtctgcagttgtccatctcactgtgccac
tccacgggggagaagaagaaccatcggacatctccagagaaacccaaaccagatgaccac
ctttacgtactggaacacaatctgcatcaaatgatgagagagttccacaagcagcagctg
agctctgtggtgatgccacatcctgctagtgccccctttggccacaaacgcctgcgacta
gcggggccactggcatatgacaaagctgaaatctccagcttgcagcagagtgaagggctg
ctggagaagatcatcaaacaggccaaacacatcttcctacgtagcaggacagcacggacc
atcgacagcctggccagccgaattgaagacccccagatccaggctcactggtctaacatc
aacgatgtgtatgagtccagcgttaaggtcctcatcacctctcagggctatgagcagatc
tgcaagtccatccagctgcagctgaacatcggagtggagcagatcagagtggtgcacaga
gatggacgtgtcatcacactgtcacatcaggaacaggagctgcaggacttccttctctct
cagatgtcgcagcatcaggtgcatgcagttcagcaactggccaaagtgatgggctggcat
gtcctcagcttcagtaaccatgtgggcctgggcccagtggagagcattggaaacgcctct
gctgtcactgttgcctctcccaatggagagtacgccatctcagtgcgtaacggcccagag
agcggatgcaaagttttggtccagttcccccgcagccagaccaaagacctgccaaagagc
gacgtcatccaggacaccaagtggagccacctcagagggcccaacaaagaggtccactgg
agcaagatggagggacgaaactttgtctacaagatggagctcctcatggctgcactgact
ccctgtccatag
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