Lates calcarifer (barramundi perch): 108872711
Help
Entry
108872711 CDS
T04895
Name
(RefSeq) calpain-5
KO
K08574
calpain-5 [EC:3.4.22.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108872711
Peptidases and inhibitors [BR:
lcf01002
]
Cysteine peptidases
Family C2: calpain family
108872711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
C2
DUF1828
Motif
Other DBs
NCBI-GeneID:
108872711
NCBI-ProteinID:
XP_018516060
UniProt:
A0A4W6G005
LinkDB
All DBs
Position
LG21:complement(22254817..22280874)
Genome browser
AA seq
637 aa
AA seq
DB search
MAVPYEGQSFSALRRQCQQNGRLFVDPLFPASDQSLFYQSNHIGRVTWKRPKELCSDPHL
FVDGISAHDLHQGQLGNCWFVAACSSLASREALWQKVIPDWKDQEWNDEKPESYAGIFHF
RFWRFGEWVDVVIDDQLPTVNGELVYCHSKDSNEFWSALVEKAYAKMCGCYEALDGGNTA
DALVDFTGGVSEPMNLTENGFKEDEEKRNELFERVLKVHNRGGLISCSIRATSAEDMEAR
LACGLVKGHAYAVTDVRKVRLGHGLLAYFRSDKLTMIRMRNPWGQREWNGPWSDSSEEWK
KVSKSEREKIGVTVQDDGEFWMTFDDFIANFTDLILCRLINTSYLSLHKTWEEAVMRGSW
RRHDDPLLNRAGGCTNNKRTFLQNPQYVFDVKKPEDEILICLQQKDRRARLKEGRGENLA
IGFDIHRVELNRIYRMHVTQQKVGGSVYINSRSVFLRIDLKEGRYVIIPTTFDPGLEGEF
LLRIFSDVSSDCKELTVDEPPQTCWSGLCGYPSLVTQVHILQANGLAGQDSDGVSDPYVI
IRCEGEKVRSPIHKNTRSPAFDTKGLFYRKKANQPISIEIYNHNVLMDSFLGQVTLPAEQ
GEFQQTLHLRDKGNRRDNDLPGTLTVAVVTSTVLTNI
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggcggttccatatgagggccagtctttctctgcactgaggaggcagtgccagcagaat
ggacgtctgtttgtagaccctctgtttcccgcatctgaccagtctttgttctaccagagc
aaccatatcggccgagtcacctggaaaagacctaaggagttatgcagcgacccccatctg
tttgttgatggcatcagtgcccacgacctgcaccaaggccagctgggaaactgctggttt
gtagctgcctgctccagtctggcatccagagaggcactctggcagaaggtgattcctgac
tggaaggaccaggagtggaatgatgaaaaaccagagtcatacgcgggaatcttccacttc
cggttctggcggtttggtgagtgggtggatgtggtgatcgatgaccagctgcctactgtg
aacggagagctggtgtactgccactccaaagacagcaacgagttctggagcgcgctggtg
gagaaggcctacgccaaaatgtgtgggtgctatgaggcgctggatgggggcaacacggcc
gacgctctcgtagatttcaccgggggcgtgtcggagccaatgaacttgacggagaatggg
ttcaaagaagatgaagaaaaacgcaatgagctgttcgagagagtccttaaagtccacaac
agaggagggctcatcagctgctcaatccgggcaaccagtgcagaggacatggaggccagg
ctggcctgcggcctggtgaaaggtcatgcctacgcggtgacagatgtccgcaaggtgagg
ctgggccacggcctgttagcctacttccggtcagacaaactcaccatgatccgcatgagg
aacccctggggacagagagagtggaacgggccctggagcgacagctctgaggagtggaag
aaggtcagtaagagtgagagggagaagattggtgtcaccgtgcaggatgacggcgagttc
tggatgacatttgatgattttatcgccaacttcacagacctcatcctatgtcgtctcatc
aacacatcctacttgagtctccataagacctgggaggaagccgtgatgcggggctcctgg
cgccgccacgacgaccctcttctcaaccgagctggaggctgcaccaacaacaagcgcacc
ttcctccaaaacccacagtatgtgtttgatgtgaagaagccagaggacgagatactgatc
tgtctacagcagaaagaccgcagagccagactgaaagagggacgaggagaaaacctggct
attggtttcgacatacacagagtggagttaaacaggatctaccgtatgcatgtcacccag
cagaaggttggtgggagtgtctacatcaactcaaggtctgtgttcctacgcattgacctg
aaagaggggcggtacgtcatcatacccacaacctttgaccccgggctggagggagagttt
ctacttcgcatcttctctgatgtgtcctcagactgcaaggagctgactgtagatgaacct
ccacagacctgctggtccgggttgtgtggttatccctctctggtcacacaggtccacata
ctgcaggctaacggactcgcaggacaagactctgacggagtgtcagacccctatgtgatc
attcgctgtgaaggagagaaagttcgctctccgatccataagaacacacgcagccctgcc
ttcgacaccaaggggctcttctacaggaagaaagccaaccagccaatcagcattgagatc
tacaaccataacgtgctgatggactccttcctgggtcaggtgacattgccagctgagcaa
ggtgaattccagcagacactccacctgagagacaagggcaaccgccgtgacaacgacctc
cccggtaccctcactgttgccgtggtgaccagcacagtgctcaccaacatctga
DBGET
integrated database retrieval system