Lates calcarifer (barramundi perch): 108872740
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Entry
108872740 CDS
T04895
Symbol
svilc
Name
(RefSeq) supervillin
KO
K10369
supervillin
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108872740 (svilc)
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Gelsolin / villin
108872740 (svilc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gelsolin
VHP
DUF7904
Motif
Other DBs
NCBI-GeneID:
108872740
NCBI-ProteinID:
XP_050930021
LinkDB
All DBs
Position
LG11:complement(4496471..>4515365)
Genome browser
AA seq
1614 aa
AA seq
DB search
LPRDMDAMENPVLEPRSERIARYKAERRRELAERYGNMEELPSKWVRRDGKEAQDPASQA
HRGTLNSDGLSERVNGRTRGVTNGLEADTPAESSYLGRQGSQDSASMLSGEGHLVPGGLD
VPQLHTRVSVGQLRSALLQQTGSGAQPEKVCPDAGRATSSLDLAVKPGTEGGRRRARRYL
PGGSGGGRKTSERFRTQPITANEMEESSGLLDAEEEENCKADVKTDDRAKMSVAAKMSLF
KELEKSAAPEASAFLKPRSGSVCHERRVRRGNDHRFLTQPITCEEMVAISAPKPALPVES
QSVQDESVEDGDESCRLSMSEKLALFNKLSLPGMQETGHPDAPPERRRQKGARYRTQPIT
VEEVSLLQKGPVQLPAFSLSPHLSDRQQASSVNLKPSEVRLSQPRPDTEPSPGQQGLQRY
DSEPGLRGILKKSRSGGSEWSRMEGGQTDAPHSHEHNGGGCGEGAVIQERTEGTERQEIA
APPRRERREASSVEGGSVTAAPWRQRARNRRETIACTPIRASSEQDAAQEERPVSSVECS
SDTNRRVLRQDEKETARKITKETTATGHVQVTLADGTSTLQETTHSSSSKEETENLHAES
VNPQCWEPVFASVYSSSTPQYIMCFNQTNQSFEAQEVSSPTKNPSQPQWRQKGRGVEDEL
FQTDRGEETDAQQQESGHMTTRETCLQPVMEVEAPQEMKEETPVDESSAFDGGFYRDHSP
PSACAPPPCGGVAATESEQDLGVLCQTNTPILTSAVAEHRRSVRPSRRTQGSRNPLRALA
AREDIRQDYMGERVNTAAEERIQAEKKSKNSDSHPRSEDFILSSDTVTTKTYPPFSSLML
IHIKGRRHVQVRLVEPSVRSLNSGDCFLLVTPEHCILWSGEFANEQEKAKASELASIIQS
QRDLGCQASQVVHLEEGLNSDGSVAADFWNLLGGRTQYRGAGAPEEDEFYEHGVVESNCV
YRLVENRLVPHEQAWASIPTISLLSATEALVFDFGSEVYLWHGQDVSLGRRSVALQLTHQ
VWVGAYDYSNCRVNPLDPTQCNPSIQLRGVGRPSWALFGVLSEHNETALFREKFKDWTSG
SEGGEDAAAESKETESVPVQASQSVSPASDLLGPCDAKSLVSGQSLEGDGLVHNVLGGVD
VQRGHGVITLEEGRQMKLNTVAVDTWHVQEFDDSEIPVESTGQLHEGDSYVIRWTYSIST
VDKINSSDECRQKENTAFFLWRGRHSSVSGRDTAAFLSIGMNIQEESQVVVPQGKEPPCF
LQLFQGGLVIHKGKREETSTNTEWRLFSVRGELPEEASLLEVDCCCAGLRSRGSVVLLNS
QQGVLYLWTGCKAQASTREVSKRVVERLTQMSPPELGLSKSSPVKVQAVDEGSEPADFWT
ALGQMDRKAYDCMLQDPGKYNFTPRLFHLSASSGSFRGEELQSPSRLPGLVMAMPFVQES
LYSVPQPALFLLDNRLEVYLWQRGQPEQTESSASAWSRWHNERRCAMETALQYCKEMNPR
RPPQAYLIFEGCEPLTFTNVFPRWERSLGPPTQGDTGRVKLTLVQDALAQLMKTQYPLEE
LLRSPLPEGVDPQHLEVYLSDQDFQTILEMKRDEYASLPSWKQTDLKKSKGLLC
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
cttccaagggacatggacgccatggagaacccggtcctggagcccagatcagagcggatc
gctcgttacaaggccgagaggaggcgagaactggctgagcgttacggcaatatggaggag
cttccttccaagtgggtgaggagggatgggaaagaggcgcaggacccggcgagccaagcc
cacagagggacactgaactcggatggtctgagtgaaagagttaatggcagaacgcgaggg
gttacaaatggactggaggcagacactcctgcagagtccagctacctgggaaggcagggt
tcccaggactctgccagcatgctgagtggggaggggcacctcgtccctggtggactcgat
gtcccacagctccacactcgggtgtcggtaggccagttgagaagtgccctcctgcaacag
acggggagcggagcgcagcctgagaaagtctgccccgatgctgggcgagccacgtcctct
ctggacctggctgtgaagccaggcacggaggggggccggcgacgtgcccgccgttacctc
cccggtgggtcaggtggcggtcgcaagactagcgaacgcttcaggacacagccgatcaca
gccaatgagatggaggagagcagcgggctgttggatgcagaggaagaggagaactgtaaa
gctgatgtgaaaacagacgacagagccaaaatgagcgtggcggccaagatgtctttgttt
aaagagctggagaagtctgcagcccccgaggcctcggccttcctgaagcctcgatcgggc
agcgtctgtcatgaacgcagggtgcgacgtggcaacgaccatcgcttccttactcagcca
atcacctgtgaggaaatggtggcgatcagcgcccccaaaccagcacttccagtggagtct
cagagcgtgcaggatgagtccgtggaggacggtgacgagagctgcaggctgagcatgagt
gagaagctggccctcttcaacaaactgtccctgccggggatgcaagaaaccggacatccc
gacgcacccccagagaggcgaaggcagaagggggctcggtaccgcacacagcccatcact
gtggaggaggtcagcctgctccagaaaggccccgtacagcttcctgccttcagtttgtcc
cctcatctgtccgacagacagcaggcctcgtctgtcaacctaaaacccagtgaggtacgt
ctttcgcagccaagaccggacacagagcccagtcctggccagcagggcctgcagcgctac
gactctgagcccggcttgagaggcatcctgaagaagagccgctccggaggctcagagtgg
agcaggatggagggcggtcagacggacgcaccgcacagccatgaacacaacggcggaggt
tgtggagaaggagcagtgatacaggagaggacggaggggacagagaggcaggaaattgct
gcaccgccgcggagagagagacgtgaggcttcgagcgtggagggaggctctgtgactgct
gctccatggaggcagagggctcgaaacaggagggaaaccatcgcctgtactccaataaga
gcctcgtcagagcaggacgctgctcaggaggagaggccggtctcctctgtggagtgcagc
tcagacacaaacagaagagtcctgagacaggatgagaaagagactgcgaggaagatcact
aaagaaaccacagccacaggacatgttcaggttactctggcagatggcacctctacactg
caggagacgacccacagcagcagtagtaaggaagagacagaaaaccttcacgctgaaagt
gttaatcctcagtgctgggaacccgtctttgcctctgtctattctagcagtacgccccaa
tatatcatgtgtttcaatcagacaaatcagtcctttgaggcacaagaagtctcctctccc
acaaagaacccgagtcagcctcagtggagacagaagggtaggggagttgaggatgagctg
tttcagacggacagaggcgaggagacggacgcacagcagcaggagagtggacacatgacc
acgagagagacctgcctgcagcctgtgatggaggttgaagctccacaggagatgaaagag
gagacgcctgtggacgaatccagcgcgttcgatggaggtttctacagggatcactcgccg
ccctccgcctgcgccccaccaccctgtggaggggttgctgccacagagagtgagcaggac
ctgggtgtcctctgccagaccaacacacccatactgacctcagctgtggcagaacacagg
cggtcggtgcgtccgtcccgtcggactcagggctccaggaaccctctgagggctctcgct
gccagagaggacatcaggcaggactacatgggcgagagagtcaacacagctgctgaggag
aggatccaggcagagaagaagtctaagaattcagattcacatcccagatcagaagacttc
atcctctcctcagacactgtgaccaccaagacttatcctcccttcagcagcctgatgctc
attcacatcaaaggcaggcggcatgtccaggtgcgtctggtggagccctcagtgcggtcg
ctgaacagtggagactgcttcctgctggtcacaccggagcactgcatcttgtggagcgga
gagtttgctaacgaacaggagaaagccaaggcctcggagctggcatcaatcatccagagt
cagagggacctcggctgtcaggcctcccaggtcgtccacctggaggaggggctgaactct
gacggcagcgtggctgcagacttctggaaccttctaggaggaaggacacaatacagagga
gctggtgctccagaggaggatgagttctatgaacacggtgtggtggagtccaactgtgtg
tacaggctggtggagaacaggctggtgcctcatgaacaagcctgggcctccatccccacc
atctccctgctgagcgccactgaggctctggtgtttgatttcggcagtgaggtgtacctg
tggcatggacaggatgtttccctcggcaggaggagcgttgctctccagctgactcaccag
gtgtgggtcggagcttatgactacagcaactgtcgagtcaacccactggatcccacgcag
tgtaaccccagcatacagctgaggggagtgggtcgtcccagctgggcgctgttcggcgtc
ctctcagagcacaacgaaacggctctgttcagagagaagtttaaggactggacgagcggg
agcgaaggcggggaggacgctgctgcagagagcaaggagacagagtctgtcccagttcaa
gcttcccagtccgtctccccagcgtcagacctcttgggcccctgcgatgccaagtctctg
gtgtcgggccagtcgctggaaggagacggtctggtccacaacgtgctgggcggggtcgat
gtccagaggggtcacggcgtcatcacgctggaggaaggacgtcagatgaagctcaacacg
gtcgcagtcgacacctggcacgtccaggagtttgacgacagtgaaattcccgtggagagc
acgggacagcttcacgagggcgactcctacgtcatccgctggacgtacagcatcagcact
gttgataagataaacagttccgatgagtgtagacaaaaagaaaacactgccttcttcctg
tggcggggccgtcactccagcgtcagtggacgtgacactgctgccttcctgtctattggg
atgaacatccaggaagaatcacaggtggttgttcctcagggaaaagaacctccctgtttc
ctgcagcttttccagggaggcctggtcattcataagggcaagcgagaggagacctccaca
aatacagagtggcgtctgttcagtgtgcgaggggagctcccagaggaggcatctctgtta
gaggtggattgctgctgtgcaggtctgcgctccaggggctctgttgtcctgctgaacagc
cagcagggggtgctgtacctctggactggctgcaaagcccaggccagcaccagagaggtt
agcaagagggtagtggagcgtctcactcaaatgtctccaccagaactgggtctcagcaaa
agcagtcctgtgaaggtgcaggcggtagacgaaggttcagagcctgcagacttctggaca
gcactaggacagatggataggaaggcttatgactgcatgctgcaggatccaggaaagtat
aacttcacacctcgtctcttccatctgagcgcctcctctgggagcttccggggcgaagag
ctgcagagtccaagccggctgccggggctcgtgatggctatgccgtttgtccaggagagc
ctgtactctgtaccgcagccagccttgttcctgctcgacaaccgtctggaggtctacctg
tggcagaggggtcagcctgagcagacagagagctcagcctcggcctggagccgctggcac
aatgagaggagatgtgccatggaaacagcgctgcagtactgcaaagagatgaacccaaga
cgcccgcctcaggcttacctcatctttgaggggtgtgaacctctcaccttcactaatgtc
ttcccccgctgggagaggagcctgggaccccccacacagggtgacacagggagggtaaag
ctgaccttggtgcaggacgccctggcccagctcatgaagacccagtaccctctggaggag
ctgctgcggagccccttacctgaaggcgtggacccccagcacctggaggtctacctgtct
gaccaggacttccagactattttggaaatgaagagagatgaatacgcctccctcccgagc
tggaagcaaactgatctgaagaaaagcaaagggttgctttgctag
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