Lates calcarifer (barramundi perch): 108872742
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Entry
108872742 CDS
T04895
Symbol
arhgap23a
Name
(RefSeq) rho GTPase-activating protein 23 isoform X4
KO
K20315
Rho GTPase-activating protein 21/23
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108872742 (arhgap23a)
Membrane trafficking [BR:
lcf04131
]
Endosome - Golgi transport
Others
Others
108872742 (arhgap23a)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
108872742 (arhgap23a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
PDZ_6
PH_9
PDZ
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
108872742
NCBI-ProteinID:
XP_018516089
UniProt:
A0AAJ7L7R0
LinkDB
All DBs
Position
LG11:complement(4569511..4639376)
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AA seq
1846 aa
AA seq
DB search
MWAVRDADLSKLRAPMPAAMLPCPAPAGSDWSFQNPVGVDCSSPEPRCIWLAVLRGTTGP
APPPSPPPAMPTGHSKSSHQARAKGRRDGLSSAGDNPRPPMATRPGREGVGVGWKGPRTL
VLHKNSQGFGFTLRHFIVYPPESALHTNLKDEENGNGKGYQKGRLEPMDTIFVKNVREKG
PAHQAGLCTGDRLVKVNGESVLGKTYSQVIALIQNSESVLELSIMPKDEDVLQLVSAYSQ
DAYLTGNEPYAGGAENLPPPPPLCYPRTKTTPPAGAPPSAPMGQNQLDNWSRWPGSSSPS
SPLDNRSAVGSPASWQEGRAGEPGGVGHSSPAHRTEEIQYGMTSQQPQGQTRGRSYSSSS
SSGGPLSSPLQVHYPNHHATSSAQPQPRKSSSAWSSPPLPQLSHSRNERCQQALSDWYYS
QLPEHSGRCMQTRHRSYSQDRLSETRRQQQRTGGWPHSASQDTLLLLQQSGPGPHGEPCW
SYGDWEGGPGRGHPASNYTRTRSENLLAQYDRHGRSLEMLDRAAAGVVSPRFERPSWHQQ
APQPPPRTDAYPRQGSHFGAVQAPPMPRHTQSHSKHHPQPHTQAHPQPQTQQAAPQTRRL
PPGQSMDDQPVGYRSYSPSFYRKTGRIMQQAHSFRDPSYSGPHLNWNPAPKTSPPEGTAA
PITSSAASPLASATPESQDRAYRPTNHERERGSVEGQAEAVPQTQEVVLRQKPPTGRRNA
HGMRHPHYALPMDGLEPSMFSSDPQDSAPAPSSTGDVAPRKPNGNLAPLPIEDDSLASIP
FIDEPTSPGADLRARHVPASSVVSSGMSSAPAVVTSPASPTFTFPLTRLFSHDCSSIKSS
RRSSYLLAITTERSKSCDEGLNTFREEGRVFSRLPKRVKSFFTDGSLDNLGTAEEVRSKR
HSTSELGNITYSDVRREGWLHFKQILTEKGKKVGSGMRPWKRVFSVLRSHSLFLYKDKRE
AVLRGATIGGSAEDEQPISIRGCLVDIAYSETKRKHALRLTTQDFCEYLLQAEDREDMLD
WIKVIRENSKTDNEELGFSRQALINKKLNDYRKQSPTGSKPDSSPRMPRMKPPFLLAKTE
NAAGAPRSPKPEGKDESSPPKSPWGINIMKKTKKAGPKAFGVRLEECQPGANNKFIPMIV
EICCGLVEEMGLEYTGIYRVPGNNAMVSMLQDQLNKGVDINPAEEKWQDLNVVSSLLKSF
FRKLPEPLFTNDKYNDFIDANRMENASDRLKTMKKLIRDLPDHYYHTLKFLVGHLKTVAD
HSDKNKMEPRNLALVFGPTLVRTSEDNMKDMVTHMPDRYKIVETLIQHYTWFFTEELDKD
EKTPVDTEDVQPAPNIDHLLSNIGRTALLGEASDSTNSDSAKSKGSWGSKKDLTAKDFLT
LSIMSAVTGRKRRKRHNARRVGSSTDDDSEHEPIKAGHLGAEEEEEAESPVGDTAPRAEG
EEDDDEEEEEEEEEEDEEVVESGAKEEVEEDEAVVSIPSRPCCKEEEETGGRQAAMLLQE
EETRVEVKGPPWRAPEDARSIVSGYSTLSTLGRSLGSEGRGDDADDEHSELVSETDNESG
FASRSLTQERPDKHPTTPVNAQPPAAPRSFLYTHYKPPVLSPTNLLAPPTPLTHTPDSAE
RSEGGARSTTPSSSSFSSSSTTHRLHSRPSFNSHKLIQCDTLARKKLKSEKAKARSLDLL
ELSETMAQGDGAGSGSEGAPRVRRETSRTNPSSGSSQESLRPARPKPALPPSEAASFTPT
GPGGRSLAEQVRARLLGSADDLRSVGLRKPLSPETRRKRRAWRRHTVVASPTETSDKRPP
LIVNEFPLSPINQNQVKTPGLPRDADGLEQGPATRQAPTSRFHQYL
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcggtgagggatgcggatctgagcaaactccgcgccccgatgcccgctgctatg
ctcccgtgccctgcgccggccgggtctgactggagcttccagaacccggtgggggtggac
tgcagctcccctgaaccacgctgcatctggctggcggtgctccgcggcaccacgggccca
gcgccgccgccgtccccaccacccgccatgcccactgggcacagcaagagctctcatcag
gccagggctaaggggcggagggatggtctctcctcagctggtgacaaccctcggccgccg
atggcgacccggccgggaagagagggggtcggcgtgggctggaagggtccccggacgctg
gtcctccataagaactcccagggtttcggtttcacgctacgccacttcatcgtttaccct
ccagagtccgccctgcacaccaacctcaaggatgaggagaacggtaatgggaaggggtat
cagaaaggtcggctggagccgatggacaccatatttgtgaagaatgtgagagagaaaggt
ccggcccaccaggcgggcttgtgcacaggggatcggctggtgaaagtgaacggagagagt
gttctaggaaagacgtactcgcaggtgatcgccctcattcagaacagtgagagtgtgttg
gagctctccattatgccaaaagatgaagatgtgcttcagttggtaagtgcatactcccag
gatgcctacctgacaggcaacgaaccctacgcagggggagctgagaacctcccgccacca
ccccccctctgttacccacgcaccaagaccacgccccctgccggagcccctccgtctgcc
cccatgggccagaaccagctggataactggagtcgctggccaggctcttccagcccgtct
tcacccttggataaccgctctgctgtgggcagccccgccagctggcaggaggggcgagca
ggagagccaggaggtgtgggtcacagcagcccagctcaccgcacagaggagatccagtac
ggtatgaccagccagcagcctcagggccagaccagggggcgctcctactcctcctcttcc
tcgtcaggaggccccctttccagcccgcttcaggtccactaccccaaccaccacgccacc
agctccgcgcagccccagccacgaaagtccagctcggcctggagcagccctcccctgccc
cagctcagccacagccgcaatgagcgctgccagcaggccctctctgactggtactacagc
cagctgcctgagcactcaggacgctgcatgcagacccgccaccgcagctactctcaggac
cggctcagtgaaaccaggaggcagcagcagcgcacaggtggctggccacacagcgcctcc
caggacactctgctgttattacagcagtcaggaccaggacctcacggagagccctgctgg
tcatatggggactgggaggggggcccaggcaggggccaccctgcctctaactacactcga
actcgctctgaaaaccttctggcccagtacgatcgtcacggccgctcgttagagatgcta
gaccgagcagcagctggagtggtctcacctcgctttgagaggccttcgtggcaccagcag
gctccccagccgccccccaggactgacgcctacccaaggcaggggagccatttcggtgca
gtgcaagctcctccgatgcccagacacacacagtcacattctaaacaccacccacagccc
cacacccaggcccacccccagccccagacccagcaggctgccccccagacccggcggctt
cccccagggcagagcatggacgaccagccagtaggctaccgcagctacagcccctctttt
taccgcaagacgggccgcatcatgcagcaggcccactctttcagggacccctcatactct
ggccctcacttgaactggaacccagcgcctaaaaccagccccccggagggcacagcggca
cccatcacctcctctgccgcatctcccctcgcctctgccacccccgaatcccaggacaga
gcgtacaggccgacgaaccacgagagggaacgagggtcagtggaggggcaggcggaggcg
gtgccgcagacccaggaagtggtgctgaggcagaaacctcccaccgggcggaggaacgcc
cacggcatgcgtcacccccactacgcgttgcccatggatgggctagaaccctctatgttt
tcttctgatccccaggactcagcccccgcccccagttccacaggagatgtagcgccacgc
aaaccgaacggcaacctcgcccccctccccatagaggatgactctctggcctccatcccc
ttcatagatgagccgacgagccccggcgctgatttgcgcgcccgccacgtgccggcgtcc
tcggtggtgtccagcggcatgagttcggcgcccgccgttgtcaccagccccgcctccccc
accttcaccttccccctcactaggctcttctcacatgactgcagcagtattaaatccagt
cgccgttcctcctatcttctagccatcaccacagagcgctccaagtcatgtgacgaagga
ctcaacacgttcagagaggaaggccgggtcttctcgaggctgccaaagagagtgaagagc
ttcttcaccgatgggtcactggataaccttgggacagcagaggaggttcgatctaaacgc
cactccacctcagagctgggaaacatcacttacagcgacgtacggcgagaggggtggctg
catttcaaacaaatcctcacagagaagggcaagaaggtgggcagtggtatgcgtccatgg
aagcgagtgttttcagtgctccgctcccattcgctgttcctctataaggacaagagggag
gcggtgcttcgcggggccacgatcggcggctcagcagaggacgagcagccgatcagcatc
cggggctgcctggtggacatcgcatacagcgagaccaaacgaaagcacgccctgagactg
accacccaggacttctgtgagtacctgctgcaggcagaggaccgggaggacatgctggac
tggatcaaggtcatcagggagaacagcaagacagacaatgaggagctcggcttctccaga
caggccctcatcaataagaaactgaacgattacagaaaacaaagtccaacaggcagcaag
cccgactcctctcccaggatgccccgcatgaagcctcccttcctgctcgccaagacggag
aacgccgctggagcgccgcgctccccaaaaccagagggcaaagatgagagcagcccgccg
aagtctccgtggggcatcaacatcatgaagaagacgaagaaggccgggcccaaagctttc
ggtgtgaggttggaggaatgtcagccaggcgcaaataacaagttcatcccgatgatcgtg
gagatctgctgcggtctggtggaggagatgggtctggaatacactgggatctacagggtt
cctgggaataacgccatggtgtcgatgctccaggaccagctcaacaagggcgtcgacatc
aaccctgcagaggagaagtggcaggacctcaacgtcgtcagcagtttactcaaatctttc
ttcaggaaacttccagagccactcttcaccaacgacaagtacaacgacttcattgatgcc
aatcggatggaaaatgcatcagacagattaaagaccatgaagaaactgatccgagacctc
ccagatcattattaccacacactgaagttcctggtcggtcacctgaagactgtagcagac
cactcagataaaaacaagatggaacctcgtaacctggctctggtgttcggaccgactctg
gttcggacgtccgaggacaacatgaaagacatggtcacacacatgcctgaccgatacaag
atagtagagacgctcatccaacattacacttggtttttcactgaggagctagacaaggat
gaaaagacgccggtggacacggaggacgtgcaacccgcccccaacattgaccacctgctg
tccaacatcggcaggaccgctctgctcggggaggcctcagactcaaccaacagtgactca
gctaaatcaaaggggtcgtgggggtcaaagaaggacctgacagccaaggacttcctgact
ctgtccattatgtcagctgtaacaggccgcaaacgcagaaagcgtcataacgcccgccgt
gtgggcagcagcaccgacgacgactcggagcacgagccaatcaaagccggacatctaggg
gcagaggaggaagaggaggcagagtcacctgtaggcgacactgctcctcgggcggaggga
gaggaggatgacgatgaagaggaagaagaagaagaagaagaggaagatgaggaagttgta
gaaagcggagcgaaagaggaggtagaagaagatgaggcggtggtgagtattcccagtcgg
ccgtgctgtaaagaggaagaggagacgggagggaggcaggcagcgatgttgctgcaggag
gaggagacacgggtggaggtgaaggggccgccatggcgagcgccagaggacgcgcgttct
atcgtttctggttactccaccctgtccacgctagggcgcagcctggggtcagagggaagg
ggggacgacgccgatgacgagcacagcgagctggtgagcgagacggataatgagagtggc
ttcgcctcgcgctccctcacccaggagagacccgataaacacccgactacacccgtgaac
gcacagccgccagcagccccgcgcagcttcctctacacacactacaaaccccctgttctc
tcgcccacaaacctgctcgccccgcccacacccctcacccacaccccggactctgcagag
aggagtgaaggaggagcgcgctccaccacgccctcgtcctcctccttctcatcctcctcc
accactcacagactgcactcgcggccttccttcaactcccacaagctgatccagtgcgac
actctggccaggaagaagctgaagtcggagaaggccaaggctcgctccctggacctgttg
gagctgtccgagaccatggctcagggtgatggggctggctctgggtctgaaggtgcaccc
agagtgaggagagagacctccagaaccaacccctcctctggcagcagccaggagagcctg
cgcccggcccggcccaaacccgctctgccgcccagcgaggccgcctccttcaccccaacc
ggccctggcggcaggtctctagccgagcaagtccgcgcccgactgctgggctcggccgac
gacctgcgcagcgtggggctgcggaaaccgctgtcgccagagacgcggaggaagagacgg
gcctggcgcaggcacacggtggtggcctccccgaccgagacgtccgacaagagacccccg
ctgattgtcaatgaattccccttgtctcctatcaatcaaaaccaggtcaaaacaccaggg
ctgcctcgggatgcagacgggctcgaacaaggaccggctactcgtcaagcacccacctct
agattccaccaatacctgtga
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integrated database retrieval system
