Lates calcarifer (barramundi perch): 108872744
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Entry
108872744 CDS
T04895
Symbol
plcd3a
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3-A isoform X2
KO
K05857
phosphatidylinositol phospholipase C, delta [EC:
3.1.4.11
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00562
Inositol phosphate metabolism
lcf01100
Metabolic pathways
lcf04020
Calcium signaling pathway
lcf04070
Phosphatidylinositol signaling system
Module
lcf_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
108872744 (plcd3a)
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108872744 (plcd3a)
04070 Phosphatidylinositol signaling system
108872744 (plcd3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108872744 (plcd3a)
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
108872744 (plcd3a)
Membrane trafficking [BR:
lcf04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
108872744 (plcd3a)
Endocytosis
Macropinocytosis
Phospholipase C
108872744 (plcd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PI-PLC-Y
EF-hand_10
EF-hand_like
C2
EF-hand_7
EF-hand_6
PH
EF-hand_1
EF-hand_5
PH_12
SPARC_Ca_bdg
EF-hand_PLCG2
Motif
Other DBs
NCBI-GeneID:
108872744
NCBI-ProteinID:
XP_018516099
UniProt:
A0AAJ7L9V2
LinkDB
All DBs
Position
LG11:complement(4541599..4565396)
Genome browser
AA seq
750 aa
AA seq
DB search
MMQGSNMVKVRSSRWQKSRHLRLLEDGLTVWCESTKSSRKAKAQQTFAVTEVECVREGCQ
SEALRRLSGSVPENQCFTVVFRGARKSLDLLCPCEDEAQRWVRGLRTLKERVANMTQKEK
LDHWIRGYLKRADQNQDGKMSYDEVKRLLQMINIDLSEQYARSLFKRCDRSGDGRLDHIE
IEEFCRELLRRPELDAVFRHYSSNGCVLSTAELRDFLGDQGEDASLNHAQSLILTYELND
WAQKNQFMTQNGFTMYMLSLENDVFNPDHARVYQDMSCPLSHYFISSSHNTYLTKDQVTS
ASSTEPYIRALNQGCRCVELDCWDGDKGEPVIYHGHTLTSKVPFKEVIETIAQYAFKASP
YPLILSLENHCSVEQQAVMAKHLRTILGSKLLTKPLSDSPLKDLPSPEELKGCILVKGKK
HTPHLGQLGKTGSCASFSSSSEDELASSNKNTPKKDPAKVCSKLSPELSELVVYCRSVSF
SGFENVSEKPPNEMSSFSESEALRLIKDSGKLFVRHNSRQLSRIYPSGQRLQSSNYDPQE
MWNGGCQMVALNFQTPGEQMDLNQGRFLPNGRCGYVLKPSFLCSPTSNFNPENTGGGPGH
VPTQMTIRIISAQQLPKINTEKASSIVDPQVWVEIHGVAIDNARDKTQRIDNNGFNPRWD
CTLSFQLQVPELALVRFVVEDHDHTAKNDFVGQFTLPFTSLRTGYRHVHLLKADGSSLSP
ATLFIHVKVSRRGVPIKTVSERMAIAKGKA
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagggctccaacatggtgaaagttcgctcttcgaggtggcagaagagccgacac
ctgcggctgctggaggacgggctcaccgtgtggtgcgagtccaccaagagctctcgcaaa
gccaaagcccagcagacatttgcagtgacagaggtggagtgtgtgcgcgagggctgccag
tccgaggcgctgaggcggctgtccgggtcggttccagaaaaccagtgcttcacggtggtc
ttcaggggagccaggaagagcctggacctgctgtgtccctgtgaagatgaagcccagcgc
tgggtgcgagggctccgcactttaaaggagcgagtggccaacatgactcagaaggaaaaa
ctggaccattggatccgaggctacctgaagcgagcggatcagaaccaggacggcaaaatg
agctacgatgaagtcaaacggctcctgcagatgatcaacattgacctgagtgagcagtac
gcccgctctctattcaagaggtgtgaccgatctggtgatggccgtctggatcacatagag
atcgaggagttctgcagggagctgctgcgacggcccgagctggatgccgtgttcagacac
tattcaagtaatggttgtgtgctctccactgctgagctgcgcgacttcctgggagaccaa
ggcgaggacgcctcgttgaatcatgctcagagcctcatactcacctatgagctcaatgac
tgggctcagaagaaccagttcatgacccagaacggtttcaccatgtacatgctgtcgctg
gagaacgacgtgtttaaccctgatcatgccagagtctatcaagacatgagctgccccctg
tctcactacttcatctcctcgtctcacaacacctaccttaccaaggaccaggtcaccagc
gccagcagcacagagccatacatcagggccctgaaccagggctgtcgctgtgtggagctg
gactgctgggatggagataaaggtgaacctgtcatctaccacggccacactctcacctcc
aaagtgccctttaaggaggtcattgaaaccatcgcccagtacgcctttaaggcttctcca
taccctctaatcctgtccttggagaaccactgttctgtggagcagcaggctgtgatggca
aaacacctccgcaccattctcggcagcaaactgctcacgaagcctctcagtgatagccca
ctgaaagacctgccttctccggaggagctgaaggggtgtatcctggtgaaagggaagaag
catactcctcacctcggccagctgggcaagactggcagctgtgccagcttctcttcaagc
tctgaggacgaactggcgagcagcaataagaacacgcccaagaaggatcctgcaaaggtc
tgctctaaactgagcccagagctatcagagctggtggtgtactgcaggagcgtctccttc
agtgggtttgaaaatgtttctgaaaaaccaccaaatgaaatgtcctccttctctgagagt
gaagccctcaggctcatcaaagactcaggaaagctttttgtgagacacaacagcaggcag
ctgagccggatctacccctccggccagcgcctccaatcatccaactatgatcctcaggaa
atgtggaacggtggatgccagatggtggctctgaacttccagacacccggggagcagatg
gacctaaaccagggtcgcttccttcccaacggtcgctgtggatacgtcctcaaacccagc
ttcctgtgcagccccacgtccaactttaacccagagaacacaggaggaggccccggtcac
gttcccacccaaatgactatacgaataatatctgcacaacagctgccaaaaatcaacaca
gaaaaagcgagctccatcgtggatccacaagtgtgggtggaaattcatggggtagctatc
gataatgcaagagacaaaacacaacgcatcgacaataatggttttaacccgcggtgggac
tgcactctgagcttccagctgcaggtccccgagctggctctggtgcggtttgtagtggag
gaccacgaccacactgccaaaaatgactttgtggggcagttcactttacctttcacaagc
cttcgcacaggttatcgacatgttcacttattaaaggcagatggatccagtctgtccccc
gccactctcttcatccacgtcaaagtcagccgcagaggagtccccatcaaaactgtgtct
gagcgtatggccattgctaaaggcaaggcatga
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