Lates calcarifer (barramundi perch): 108872808
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Entry
108872808 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: fer-1-like protein 6
KO
K22127
fer-1-like protein 6
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108872808
Membrane trafficking [BR:
lcf04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
108872808
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Ortholog
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GFIT
Motif
Pfam:
C2
Ferlin_C
FerB
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
108872808
NCBI-ProteinID:
XP_018516189
LinkDB
All DBs
Position
LG1:5637788..5664285
Genome browser
AA seq
1891 aa
AA seq
DB search
MDPFESPATERRKAKTMFGLKVKKKKKKVNTDLVLANKGAVDSETEAPSEASPLLEGENT
EDQPGTSAVRTRVIPNNKRSKLNTHIQDSEGKPQSFQIAINITEARQLVGENIDPSVVIE
IGDEKKQTSVKEGTNAPFYNEYFVFDFFAHKTVFFDKVIKLTVMHSKMLRSFCIGSFKLD
VWTVYKQPGHQFINKWAMLTNPGDISTGVKGYVKCDISVSAKGDNMQPGPKASDAEEQID
KNLLIPEGFPAERPWARFFVKVYRAEGLPRNNSSIMANVTKAFIGDNTALIDPYVVVSFF
KKVGRTSTQKSTADPVWNEQIVFTEMFPPLCQRLKIQVWDEGSMNDVAIGTHYFDLRRVS
NEQDGDRGFLPTFGPAWINLYGSARNFSLGDDTVELNEGIGEGVSYRGRVYMELAVEILS
GGAGAESKLSKMIKPTKDVKAGKAGGKDGKTAAGGAPPEDDDKGKNVAAEVLPVESPPVL
NADNNESFLLFGALFEATMIDRKIGDRPISIEFSLGNFGNVLESTGQGQGQGQPSISVTV
SPAPRRRGLDVPDTSDSFGGPSLSTSPSSPSSPLLPRASQDTASTSASNKSTTPPQKPLI
TEGNRHYMYLPLENQKPCINVLSQWEDRTYRLYNSNMLENIAVLFEDGVASAEEQHKRAD
PGAEDTLKTTVREFCMDARSFIAAAEAKLKAELKSSYLTQLDKKRLTLCTQELESVIGDA
QSLLERKKKAGGVKEMLQDAIKLTHRIRFLVEEPQHTIPDVFVWLLSHNKRIAYARVRAR
DLLFSSSQETRGIHCGKIITLFLRPPGKRVAGLSVQAKLDVYLWLGTCLDSGSMLDDLPA
GFTPASGGVDASNPPAYLVSAEQHQFQLRCHMYQARGLIAADNSGLSDPFARVTYLSHSQ
TTNIISQTLSPTWNQCLPMSRLLLSGDLQHIQKEPPRIIIEVYDDDALGKAEYLGATVAV
PEVRLSSEAYTPPMLQYSPLHCGSQPGGDLLAAFELLQIPESGDQDLPPLEEQEGIYTVP
ANIRPVLSTYRLEVLFWGLRELKKVQFLSVDRPQVFIECAGKTLRSSVIQKYKSNPNFTI
LVDAIELELPENEHLHPPLSITVVDWRAFGRSTLVGNHIINNLKAFKYIPPPALPAPIQT
HKPPEVTFTPGPALTPEPQSTEGPLQHPGEPSTAVAITDQDFLITVEDEAPPPAPPPAPP
TPKQETRKKKESGTKSTRGRSTKRRKRTIADESAESVIDWWSKYYASVEKEAKQKDGSLI
PQVLGKATPFHSLLSDGIDNLVSDGDKKKQHKGKGTLEQNLGLPTKLATLKLYDRELEVD
FGPFDDWVKTYELFRGKANEEDGATDERFVGKFKGRFCLYKLTEDEAEDWDEVADSGHFR
VSRGIPSNGSVQVLIRVYIVSASNLHPADPDGKADPYIVLRLGKNEIKDRDNYIPKQLNP
VFGRSFEIQAKFPQESLLSVLIYDYDLVGGDDLIGETRIDLENRFYSQHRATCGLPTEYS
LDGYNAWRDCLKPSELLSKLCKDNGLDGPHFRPGRITVADKIFTGKTRFMVEDQPVESYE
HLSLKILHRWAEIPAVGCKLVPEHIETRTLYNKARPGMDQGQLQMWVDMFPMDLPHPGPS
VDISPRKPKGYELRIIIWNTEDVILEDSNFLTGQQSSDIYIKGWLKGLEDDKQETDVHYN
SLTGEGNFNWRFVFPFSYMPAEKVIVVKKRESIFSLDKTEQKLPAILILQVWDFETLSSD
DFLGTVELDLHGFPRGAKSAKSCKVDMLTDGTEKISIFQQKRARGWWPFSKSGELTGKVE
AEFHLVTAEEAEKNPVGRARKEPEPLPKPNRPDTSFSWFVNPFKCFFHLVWRSYKKYIII
ALILLITLLFLALLFYTLPGAISNRIVNPRP
NT seq
5676 nt
NT seq
+upstream
nt +downstream
nt
atggatccttttgagagtcctgcaaccgagcgacgaaaggctaagacgatgtttggcctg
aaagtgaagaaaaagaagaagaaagtcaacacagacctggttctggcaaacaaaggagct
gtggacagtgagacagaggcaccctcagaagcgtctcccctgctggagggagaaaacact
gaagatcaaccaggaacctctgcagtcagaaccagagtaataccaaacaacaagaggtcc
aaattgaatactcacatccaagacagtgaagggaaaccacagagcttccagattgccatt
aacatcacagaggccagacagctagtgggggaaaacattgaccccagtgttgtgattgag
atcggtgatgagaagaaacagacatcggtcaaagaaggaaccaatgctcccttttacaat
gagtatttcgtgtttgacttctttgcccataaaacggtcttcttcgacaaagttatcaag
cttactgtgatgcactctaagatgctgaggagtttctgtattggctcctttaagctggat
gtgtggacagtctacaaacagccaggtcaccagtttatcaataagtgggcaatgctgact
aatcccggtgacattagcactggggtcaaaggttatgtcaagtgtgacatcagcgtctca
gcaaagggagataacatgcaaccaggtccaaaagcgagtgatgctgaagagcagatagac
aagaacctcctgataccagaaggttttcctgctgaacgaccctgggctcgtttctttgtc
aaggtgtatcgagctgaaggccttcccaggaacaactccagcatcatggccaatgtcacc
aaggccttcataggagacaacacagcactcatagacccatatgtagtggtcagcttcttc
aaaaaagtgggtcgcacatccactcaaaagtccacagcagacccagtgtggaacgagcag
attgtcttcacagagatgtttcctcctctgtgtcagagactgaagatccaggtctgggat
gagggaagcatgaatgatgttgccataggaacccactactttgacctgagacgtgtctcc
aacgaacaggatggtgatagagggtttttaccaacttttggtcctgcttggatcaacctg
tatggctctgcccgaaacttttcacttggtgatgacacagtggagcttaatgagggcatc
ggagagggtgtgtcatacagggggcgggtctacatggagctggcagtggagatcctatca
ggaggcgcgggtgcagagtccaaactcagcaaaatgatcaagcccacgaaagatgttaaa
gcaggaaaagctggagggaaggatggtaagactgctgcaggaggagcaccaccggaggat
gatgacaaagggaaaaatgttgcagcagaggtcctgcccgtggaatctcctcctgtgctg
aatgctgacaacaacgagagcttcctgctgtttggagcgttgtttgaagccaccatgatt
gacagaaagattggtgacagaccaatcagcattgagttttccctgggcaactttggtaat
gtcctagagtctacaggccagggacagggccagggccagcctagcatcagtgtcactgtc
agtcctgctccaaggagaagagggcttgacgtcccagacaccagtgacagcttcggcggc
ccctctctgagcacctccccttcctccccgtcttcccccctcctacccagagcttctcag
gacactgcttcgacttctgcctccaacaagtccaccacacctccacagaaaccgctcatc
actgaaggaaacaggcactacatgtatctacccctggagaatcagaagccatgtattaat
gtgctgagtcagtgggaggacagaacttatcgactctacaactccaatatgctggagaat
atagctgttctgtttgaggatggtgttgccagtgcagaggagcaacacaagagggcagat
cctggggcggaggatacactcaaaaccactgtgagagagttctgtatggatgccaggagt
ttcatagcagcagcagaggccaagttgaaagcagagctaaagtccagttacctgacacaa
ctggataagaaacgccttaccctgtgtacacaggagctggagagtgtgattggggatgcc
cagtccttgttagagaggaagaagaaagctggtggtgtgaaagaaatgctgcaggatgca
ataaaactcacacacagaatacgctttcttgtggaggagccccagcacacaataccagat
gtgtttgtgtggttgctaagccataacaagcgcattgcgtatgctcgggttcgagccaga
gacctgctgttctctagcagccaggagaccagaggaatccactgtggcaagataataaca
ctgtttctgaggcctccagggaagcgtgttgcaggcttatcagtccaagcaaagctagat
gtgtatctgtggcttggaacctgtttagactctggctctatgttggacgacttgcctgca
ggattcactccggcctcagggggagttgatgccagcaaccctccagcataccttgtctcc
gcagagcagcatcagttccagctgaggtgccacatgtatcaggctcgtggtctgatcgct
gccgacaactccggcctctctgatcctttcgcacgtgttacctacctgtcacacagccaa
accaccaatattatcagtcagactctcagtcctacatggaatcaatgtttgcccatgagc
cgcctgctgctgagtggagatctgcagcacatccaaaaggagccgccacgcatcatcatt
gaggtctacgatgatgacgcactgggcaaggcagagtatctaggagccacagtagcagtg
cctgaggttcggttgtcctctgaggcctacacacctccaatgctacaatacagcccgctg
cactgcggcagccagccaggaggagacctgttggctgcatttgaactgctgcagatccca
gagtctggagaccaggatctgccgccgttagaggaacaggaaggcatctatacggttcct
gccaacatcagacctgttctcagcacctacaggctagaggtgttattctggggtctgagg
gagctaaagaaagttcagttcctgtctgttgatcgcccacaggtctttatagagtgtgca
ggtaaaactttgcgctcttccgtcattcagaagtacaagtccaacccaaacttcaccatt
ctggttgatgccatagagctggagttgccagagaatgaacacctccatcctcctctcagt
atcactgtagttgattggcgggccttcggccggagcacactcgttggaaaccacatcatc
aacaacctcaaggccttcaaatacattccacctccagccctgccggctcccatacagaca
cacaagcctcccgaagtcacctttacccctggacccgcattgacaccagagccacaaagc
actgagggacccttgcagcatcctggagagcccagtactgctgtagcaataacagatcaa
gatttccttatcactgtggaggatgaagcccctcctccagccccgcctccagccccgcct
accccgaagcaagaaaccaggaagaaaaaggagagcggcacaaagagcactcgtgggcgt
tccaccaagcggaggaagcgaactattgctgacgaatcagcagagagtgtaattgactgg
tggtccaaatactatgcgtctgtagagaaagaggctaagcagaaggacggctccctaatc
ccccaggtccttggaaaagctacgccgttccacagcttgctcagcgatggaatagacaat
ttggtctcagatggagacaagaagaaacaacataaaggaaaaggaaccctggagcaaaat
cttggtctgcccactaaattagccacactcaagctgtacgacagggagctggaggtagac
tttgggccatttgatgattgggtgaaaacatacgagctgttcagagggaaagccaatgag
gaagatggggcgactgatgagaggttcgttggcaaatttaaggggcgattctgcttgtat
aagcttacagaggatgaggcagaggactgggatgaagtcgcagactctgggcacttcaga
gtcagcagaggaatcccttccaatggctccgtccaagtcctcatacgggtttacatagtc
tctgcatctaacttgcaccccgctgaccctgatgggaaggcagacccttatattgttctt
cgccttggcaaaaatgaaatcaaagacagagacaactacattcctaaacagctaaaccct
gtctttggaagatcttttgagattcaggctaaatttccgcaggagtctctactgtcggtg
ctaatctatgactatgacttggtgggaggggacgatctgataggagagacacgtatagac
ctggagaaccggttctacagccaacacagagccacctgtggactccctacagagtacagt
cttgatggttataatgcctggagagactgtctgaagccatcagagctgttgtctaagctg
tgcaaagacaacggtctggatggtcctcatttcagaccgggacgtatcaccgtggcggac
aaaatcttcactggcaaaactcgcttcatggttgaagaccagccagtggagtcctatgag
cacttgtctctgaagatcctgcaccgctgggctgagattccagctgttggatgcaagctg
gtaccagaacacatcgagaccagaactctatacaacaaagcccggcccggcatggaccag
ggtcagctacagatgtgggtcgacatgtttcccatggacttgcctcatcctggaccttca
gtggacatttcacctcgaaaaccaaaagggtacgagctgcgaatcatcatctggaacaca
gaagatgtgattctggaggacagtaacttcctgactggtcagcagtccagtgatatctac
atcaagggttggctgaaaggcttagaggatgataaacaggagactgatgtgcactacaac
tctctgactggagagggaaacttcaactggcgctttgtcttccccttcagctacatgcct
gctgagaaggtgatagtggtgaagaagagagagagcattttctctttggataaaacggag
cagaagcttcctgccattctcattctgcaggtctgggactttgagacgctctcctctgac
gatttcctaggcactgtggagttagacctgcatggcttccctcgtggggcaaagtcagcc
aagtcatgtaaagtggacatgttgacggacgggacagagaaaatctccatcttccagcag
aagagagcaagaggctggtggcccttcagcaaatctggagagctgacggggaaagtggag
gctgagttccatctcgtgacggctgaggaggccgagaaaaatcctgttggccgagcccgt
aaggagccagagccacttccaaaaccaaaccgtccagacacctccttctcatggtttgtc
aatccattcaagtgtttcttccatctggtgtggcgaagctacaagaaatacatcatcatc
gccctgatcctgctcatcacgctgctgttcctcgccttgctgttctacacactgccagga
gccatctctaataggatagtaaatccacgcccctag
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