KEGG   Lates calcarifer (barramundi perch): 108872815
Entry
108872815         CDS       T04895                                 
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03410  Base excision repair
lcf04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    108872815
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    108872815
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcf03400]
    108872815
DNA repair and recombination proteins [BR:lcf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     108872815
SSDB
Motif
Pfam: VIT PARP VWA_3 VIT_2 BRCT_2 VWA BRCT VWA_2 VWA_CoxE TniB PARP_reg
Other DBs
NCBI-GeneID: 108872815
NCBI-ProteinID: XP_018516211
UniProt: A0AAJ7PBQ9
LinkDB
Position
LG1:complement(5060690..5076198)
AA seq 1364 aa
MAVFEDCTVLLELKSLPFKEKKKLKSAITENGGSISFVVNKQCSLIVTSDVSNLSSNRLR
SIQKHQTPVVGVEYVYSCVDRGVLLPVDGYKLDTSSVSAFSPLLPLSSPRPDPLSHQVSK
VPKSTAAEPPKGQAKPVNSVSLTQRAETPKRSGNVLEKFRIFAETDADLPSYPHNFQVAK
YSIFEKINSNTWCVLELQSAKAEKGQQYRVVKYWKNDILAKKDAVKDMLVFLSTSEEALE
VYQALRKTLLATGLQLRSSIPPQAPTLGSTPLQQLLLEEKLNTGSLSQEVGVFVELLWTE
SLGYLGNILKVSIDKLSLNDVSRAEGLLLQAQRKLREAKHAEVASLLEEVYTLLPHCAAP
LPPNAKFISQKLDLCQLIRDVLNTSEMTLRSPAPSCLGKYRALRCSIETVPPSCSEFQAV
AALVQKSEVQIQQVLRVSRGVELQTFKSELGNVKPLLHSSNPSNFVGILSRGLLLPRVGV
EHHGIERTDIGNLGSGIYFSDAVSTSLKYSMPSVTDGSRLLLVCDVALGSCKDIHKKDYT
LTEAPEGHHSVHGVRHTPNTHSEFEDDEYVVYSPDQVKLKYIVQFSIKGDQLKEFSPEIN
ISAKPCLPPPDQELSLEDDGVESIKNPLEDVTAGLLDSSGQQLPLQAVHVKCKLMDLLSQ
VIIFQKYTNMSSVPIEAKYVFPLDDTAAVCGFEAFINGKHVVGKVKEKEKARKEYKQAIE
KGHGAYLMDQDAPDVFTISVGNLPPGATVLIKVTFVSELIVRDGSILFSLPGSVAPWQES
AALNQTTQVTLTKVCVTDKAASTREFTLDMSIEMPYEITSLQCITHKVKIKRTDCKAVVS
VLPGEVMGAEGFQLSVTLSEVHLPRMWVEKHPDKDSQACMLVFYPDFDTNSSSASDEVVL
LLDTSESMKGESLCMAQKIALQVLKTLGHNLRINVILFGTDHTDAFLTAQPLAEARHAAE
NLIRRLPPVGGSTELWRPLRALNLLPPSHGTRNLLLLSDGHIQNAELTLQLLRENAQHSR
LFTCGLSPTANRHMLRALAQAGGGAYEFFDTKTKHNWTEKVACQVKRIASPGCSSVSVKW
QQFNPTAPTPVQAPRQLHALFNDCHTLVYGFVPHCTQATLLGNLSGQELKTMVSTSELQK
TRGTFLHKLTARALIRDYEDGSLDANEAEHEGKKAELKSFIIELSKEFSILSQFTSFVAI
EERDSEQPDEGFTDIPKLIAEEDVDFLPYISWNLPQDSEEEEEDMDMGFYLADIETNAMQ
DYTFCVGSSLDMAMDLSVNSASMDPDSPQYSPTSPSYSSDASPVPYAAAALPDFGHSHAE
LKAFSRMSRVKRNEFEREAEYPDANRGYSQTPPSSPCSLSSSYS
NT seq 4095 nt   +upstreamnt  +downstreamnt
atggctgtgttcgaggactgcactgtacttttggagctgaaatctttgcctttcaaggag
aagaagaagctaaagtcagcaataacagagaatggaggcagcatttcctttgtggtcaat
aaacagtgctctctgatagtgaccagcgatgtgtccaacctgagctccaacaggctacgt
agcatccaaaagcaccaaactcctgtggtcggggtggagtatgtgtacagctgtgtggac
agaggagttcttctgcctgtggatggatacaagctggacacttcctctgtctctgctttt
tcacctctgcttcctctctcctcaccgagaccagatccactctcacatcaagtttccaaa
gtaccaaagagcacagcagctgagcctcccaaaggtcaggccaagcctgtgaattccgtc
agcctgactcagagggcagaaactccgaagaggagtggaaatgttctggaaaagttcaga
atttttgctgaaactgatgctgatcttccatcatatccacataattttcaagtggccaag
tattcaatctttgagaagataaacagcaacacttggtgtgtgctggagctgcagagtgcc
aaagcagagaaaggacagcagtaccgtgtggtcaagtactggaagaatgatatattagcc
aagaaggatgcagtgaaggacatgctggtgtttctgtccacatcagaggaagctctagag
gtgtaccaagcactgagaaagactctgttggctactggtttgcagctgaggagcagcatc
cccccacaggccccgaccctgggctccacccccctgcagcagctgctgctggaggagaaa
ttgaacacaggaagcttatcacaggaagtgggcgtctttgtggagctgctgtggactgaa
tccctgggttaccttggcaacatcctcaaagtttcaatcgacaagctcagcctcaatgat
gtgagcagggcagagggcttgttgcttcaggctcagaggaagctacgagaggcaaagcat
gctgaggtggcatctctcctggaggaggtttacaccctgctgccacactgcgcggcgccc
ttacctcccaatgccaagttcatctctcagaaactggacctctgccagttaatcagagat
gttttgaacacgagtgagatgactctgagaagtcccgctccttcctgtctggggaagtac
cgtgctctgaggtgcagcattgagaccgttccccccagctgctccgagtttcaggctgtg
gctgctctggtgcagaaaagcgaggtgcagattcaacaggttctgcgtgtcagcagaggg
gtggagcttcagacatttaagagtgagcttgggaacgttaagccactgctccattcctcc
aaccccagcaactttgtaggaatcctgtctcgtggtctactgttgccccgtgtcggagtg
gagcatcatgggatagagagaacagacattggtaatctgggcagtggaatctacttcagt
gatgctgttagcaccagtttgaagtactccatgcccagtgtgacagacggctctcggctg
ctgttggtgtgtgatgtggctttgggaagttgtaaggacatccacaagaaagactacaca
ttgactgaagcccctgaaggacaccacagcgtgcacggagtccgccatacccccaacact
cactctgagtttgaggatgatgagtatgtggtgtacagtcctgatcaagtgaaactgaag
tacatagttcagttcagcatcaaaggggaccaactgaaggagttcagtcctgaaatcaac
atctctgctaagccatgtctgcctcctcctgatcaagagctcagtttggaggatgacggg
gttgaaagcattaaaaacccactggaggatgtgacggctggactgttagacagctctggt
cagcagctccctctgcaggctgtccatgtgaagtgtaaactgatggatctgctctctcag
gtcatcattttccaaaaatataccaacatgagctctgtgcccattgaggcaaagtatgtc
ttcccattggatgacactgcagcagtctgtggatttgaagcttttataaatgggaaacat
gtggtgggaaaggtgaaggagaaagagaaggctcgcaaagaatacaagcaggctattgaa
aaaggacatggagcatatctgatggaccaagatgctcctgacgtctttaccatcagtgtg
ggcaatctgccgcccggggcgactgtcctcattaaagttacctttgtgtctgagttgatc
gtcagggatgggagtattctcttctccctgcctgggagtgtggctccatggcaggagagt
gcagcactcaaccaaaccacacaagtcactctaacaaaggtgtgtgtgactgataaggca
gcaagtacaagagagttcactctggacatgtcaattgagatgccatatgaaatcaccagc
ctgcagtgcatcactcacaaagtcaagattaagagaacagactgtaaggcagtagtgagt
gtgctgcccggagaagtcatgggtgcagaaggtttccagctatcagtcactctgtctgag
gtccacctgcctaggatgtgggtggagaaacaccctgacaaggacagccaggcctgcatg
ttggttttctatccagactttgacaccaactccagctcagcatccgatgaagttgtcctg
ttgctggacacatctgagtccatgaagggagagtctctctgcatggcccagaaaattgcc
cttcaggtcctcaaaacgcttggccacaacctcagaatcaatgtcattttatttggcaca
gatcacacagatgcgttcctgacagcacagccacttgctgaagctcgacatgcagcagag
aacctcatcaggcgcttacctccagtaggtggcagcactgagctgtggcggcccctgcgt
gctctcaatctgctgcccccatcccatggcaccaggaacctgctgctgctgtcggacggc
cacatccagaatgcagagctcaccttgcagctgctcagagaaaatgctcagcacagccgt
ctcttcacctgtggcctcagcccaacagccaatcggcacatgctgagagctctggcccaa
gcagggggtggggcctatgaattctttgacactaaaaccaaacacaactggacagagaag
gtagcatgtcaggtgaagcgtattgcatctcctggctgcagctcagtgtcagtgaagtgg
cagcagttcaacccaacagcacccactcctgtgcaagcccccagacagctccacgctttg
ttcaatgactgtcacaccctggtctatggctttgtgccacactgcactcaggccaccctc
cttggaaacctgagtggccaggagctcaaaaccatggtgtcgaccagtgagttgcagaag
actaggggcacatttcttcacaagctcacagcacgagccctgatcagggattatgaagac
ggaagcctggatgccaatgaggctgaacatgaggggaagaaagcagagttgaagtccttc
atcatcgagttaagcaaagagttctccattctgtctcagttcaccagttttgtggccatt
gaggaaagggactcagagcaaccagacgagggtttcacagacatccccaagttaatcgca
gaggaagatgtggacttcctcccttacatcagctggaatctcccacaggatagtgaagaa
gaggaggaagacatggacatgggtttttacttagctgatattgaaactaatgccatgcag
gattacaccttttgtgtaggtagttcacttgatatggcaatggacttgtctgtgaactca
gcatcaatggacccagactctccacaatattcaccaacgagtccctcttactcatctgat
gcatcacctgtgccatatgctgcagcagctctaccagattttggtcacagtcatgctgaa
ttgaaggcattttccaggatgtccagagtaaagaggaatgagtttgagagagaggctgaa
tatcctgatgcaaacaggggatatagccagactcccccctcctccccctgctctttgtcg
tcctcctattcttaa

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