Lates calcarifer (barramundi perch): 108872942
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Entry
108872942 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: DNA helicase MCM8
KO
K10737
DNA helicase MCM8 [EC:
5.6.2.4
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcf03032
]
108872942
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108872942
Enzymes [BR:
lcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108872942
DNA replication proteins [BR:
lcf03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
108872942
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108872942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
MCM8_N
WHD_MCM8
MCM_OB
MCM_lid
Mg_chelatase
AAA_5
AAA_3
Sigma54_activat
AAA
GNC1_N
Phage_TAC_18
AAA_16
FtsK_SpoIIIE
RuvB_N
Motif
Other DBs
NCBI-GeneID:
108872942
NCBI-ProteinID:
XP_018516389
UniProt:
A0AAJ7L851
LinkDB
All DBs
Position
LG16_LG22:17857631..17866141
Genome browser
AA seq
890 aa
AA seq
DB search
MSGGESRGGSWRGGRGGRRGGGGGGGGGGGGGGSGGGGGSGWRGGGGGWRGGGSGWRGGG
GGWRNGGGGWRGGGWRGRPWRGGSGGGGRGSGGGVWRGGGGLGSGGSGTFGTQRALCQVT
LDALCPYKGWALYFTEGFIESAPTVKKIKVFEKYFTSRIHLYDKDEIERQGSILVDYADL
IGDKTVRKALPDLTTELKEQPELILNSLGVAIHQVLTVDLEKQAAELQGEELPVATPIIN
IPHISARLYNYEPLTPLRTLRASVFGRLVCVKGTVVRVSNIRPFCTRLAFICLGCSHTQS
LPLQHGKYATPTKCTQPDCRSRSFTPCRSSPLTHAVDWQIIKVQELMGGEQRETGRIPRT
VECHLTSDLCDSCVPGDTVTVTGIVRVTNDGISRGNKDQCMFLLYLEGISVSNTKGQPSK
SGQGSRGSLEDRSGGEEFSLKELYAIQEIQSQPDLLRVIVHSLCPVIYGHLLVKAALALA
LFGGRQKHTDKNSVPVRGDPHILMVGDPGLGKSQMLQAVCNVAPRGIYVCGNSTSTTGLT
VNLSRDAGTGDYALEAGALVLADQGLCCIDEFDKLGSQQQALLEAMEQQSVSLAKAGIVS
SLPARTSVVAAANPVGGHYNRGKTVSENLKMGSALLSRFDVVFLLLDIPDESHDRRLSEH
VMANRVGRGRTSSATVTRANNQFDTSILLEDSDMPLSERLQIPAGETLDPIPTCLLRKYI
SYARQYVRPSLSPEAAQTLQDFYLSLRSQRHSADATPITTRQLESLIRLTEARARLDLRE
TATKSDAEDVVEIMKHSLADTYSDGLGNLDFERSQLGSGMSQRSAGKRLINALHSHAQRT
NQKQFDLQMLRTVASSLNIKVADFEGLVSSLNEQGFLLKKGAKLYQLQTV
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaggggaatccagaggaggctcctggaggggtgggagaggaggaagaagagga
ggaggaggaggtggtggtggcggtggtggcggtggtggcagtggtggcggtggcggcagt
ggatggagaggaggtggaggaggatggagaggaggtggtagtggatggagaggaggtggg
ggaggatggagaaatggtggtggaggatggagagggggaggatggaggggtagaccatgg
agaggaggatcaggaggaggaggaagaggttcaggaggaggagtatggagaggtggaggt
ggtcttgggtcaggaggatcaggtaccttcggcactcagagggctctttgtcaggttact
ctggatgcactgtgtccatacaaaggatgggcactttacttcacagaaggcttcatagag
agtgcacctactgtgaagaagatcaaagtttttgagaaatatttcacttccaggattcac
ctgtatgacaaggatgagattgagcgtcagggcagtattctggtggattatgcagacttg
attggagacaagactgtgcgtaaagcgcttcctgacctaacaacagagctgaaggaacaa
ccagagttgatactcaactctttgggagtggccattcaccaggtgttgactgtagatttg
gagaaacaggctgctgagttgcaaggggaagagcttcctgttgctactccaatcatcaac
atccctcatattagcgcaaggctgtataactacgaaccgttgactccgttgcggacactg
cgtgccagtgtgtttggacggctggtgtgtgtgaagggaacagtggtcagagttagcaat
atcagacctttctgtaccaggttggccttcatatgtctgggctgctcacatacccagtct
ctgcccctgcagcatgggaaatacgctacacctactaagtgtacccagcctgactgtcgc
agtcgttccttcaccccttgcaggagttctcctcttacacatgctgtagactggcagatc
atcaaggtgcaggagttgatgggtggggagcagagagagactggaagaatcccacgcact
gtggagtgtcacctgacctccgacctctgtgacagctgcgtccctggagacactgttact
gttacagggatagttagagttaccaatgatggtatttcccggggaaataaggatcagtgt
atgttcctcctctatcttgaaggcatttcagtcagtaatactaaaggtcagccgtccaag
tcgggtcaggggtcaagagggtcgcttgaagatcgttctggcggggaggagttcagtctg
aaggagctgtatgccatccaggagatccagtcacagcctgacctgctgagagtcatagtg
cactctttgtgtcctgtcatctatggccatctactggtgaaagctgctcttgccttggca
ttgtttggaggcagacagaaacacacagacaagaacagtgttccagtcagaggagaccca
cacatcctgatggtgggagaccctggactggggaagagtcagatgttacaggcagtgtgc
aatgtggctcccagaggaatttatgtatgtggtaacagtaccagcaccacaggactaaca
gtgaatttatcccgagacgcaggaacaggggattatgctctggaggctggagccttggtg
ctggctgaccaaggtttgtgttgcattgatgagtttgataagttgggcagccagcagcag
gctctgttggaagccatggagcagcagtctgtgagtctggcaaaggcaggaatagtttcc
tctcttcctgctagaacctcagtcgtagctgcagcgaacccagttggaggacattacaac
agaggcaagactgtctctgaaaacttgaaaatgggctcggctctcctctctcgctttgac
gttgtcttcctcctgctggacatcccagatgagtcacatgaccgtcgcctgtcagagcat
gtcatggcaaatagggtaggaagaggcagaaccagcagtgccacagtcaccagggctaac
aatcagtttgacacctccatcctattagaagactcagacatgccactgtctgaacgttta
cagatccctgcaggtgaaactttagaccccattccaacttgcttgctaaggaagtacatc
agctatgctcgacagtacgtacgtccctcactgtctcctgaagcagcacagacacttcag
gacttctatctgtcactaagatctcagcggcattctgctgatgccacacccatcaccaca
cgacaactggagtctttaattagactaactgaggcaagagccaggttggacctgagagag
acggctactaagagtgatgcagaggatgtggtggagatcatgaaacacagtctggctgat
acatattcagatggcctgggcaatctggactttgagcgctctcagcttgggtcaggtatg
agtcaacgcagtgctggaaaacgattgatcaacgcgctgcactctcacgcacagaggacc
aatcagaagcagtttgacctccagatgcttcgaactgtggccagcagtctgaacatcaag
gtggcagactttgaaggtctggtgagttccctgaatgaacagggtttcctgctgaagaaa
ggagccaagttataccagctgcagacagtctga
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