Lates calcarifer (barramundi perch): 108872987
Help
Entry
108872987 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: myocardin related transcription factor Ab
KO
K22525
MKL/myocardin-like protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
108872987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPEL
SAP
Motif
Other DBs
NCBI-GeneID:
108872987
NCBI-ProteinID:
XP_050922480
UniProt:
A0AAJ8DKI9
LinkDB
All DBs
Position
LG23:3204986..3242893
Genome browser
AA seq
1304 aa
AA seq
DB search
MVKKALLSAGLSVTLATQQPQIGEEPSPGSMEVTGTPGSAPSPQSEAVTNELQELSLQPA
PNLLPLQERKNVLQLKLQQRRTREELVSQGIMPPLKSPAAFHEQRRSLERARTEDYLKRK
IRSRPERSELVRMHILEETSAEPSLQAKQLQLKRARLADDLNDKISHRPGPIELVHKNIL
SVSCPLQHSLLDSPKGAGGESSSLDEDSSDALSPDQLTNHDSPLSAVPQLSPSDALTQNG
DMSPTQFLTQPPPPPPPPPPPQVNGSDSSPPPKLTNGTTMVTSASPRSSTGQVKQSQAKT
SSDRPPQRSKKPKDNKPKVKKLKYHQYIPPDQKADKERPPQMDSSYAKLLQQQQLFLQLQ
ILSQQQQHYNYHTILPAPPKPPTEQPPTTNSGPSPSRSVPTTTTTGPSNQSGTARQSQTA
VGGAKPITLPANLDEFKVAELKQELKLRGLTVSGTKNDLIERLRNYQEQNGGTTAVLKNG
MLQPSPQGANSASSTVTSSPTTTTGPDHQSAEGGFKLALSSLAHAVPGRVMRFGSTSSSP
PVSPTPSERSLAGMSPDETSCNGDMFGEMVSSPLTQLTLHPSPQHPSNISPLSQPLPKVK
EEIQSPCSLSRSSSASGQSPELPGVAMDASSMDKDQMLQEKDKQIEELTRMLRQKQRLVE
TLRSQLEQGKMAGGVVLEKEGSEKGKQSSEVKFQTLIKASAIQPPTLPNGIVVKVKKEVE
PEEEMEGVTEEAQAKKLAPPMQCSQETLLRLQQIQRLQVQQAEQQKRQLQQPKQQQSQVQ
LQKVSEAKSTPQKQQQQKKEAQILLHQQQQLQQLIIQQTQQKQLQAQQKLAQQKLTQQKL
VQQNQLKQTQGQVQQSQQKNQVQLKQVQVQIQNQTVASQKPAANQTQQRKQLKAHQRQKQ
QTAAVATQQVTPVFINQQNGTQIHTQAISLDLLKANGTPTLVTDSNGNHYLIALTSHTAD
GQNGVSSLAKTNGRITLQRLQSTPSKLPSTESQSKEQTEAEPASQPIKKGQKAGLHLDTN
GVPQPNLSVTAPPSLQPFFDDMSDSESQSNLISSLKENGVNSQQMDDLFDILLKSGGKXT
AVNTERDVMSLSSAALMRFFSLCPPPEIPGFKANPDPSLAPLHSDPPSPSSPPSPLHLSP
PTPTESLISPQPSVGEPCTGSGRLEDFLESTTGAPLLGVEPDGGLTLIDDLHSQMLSTPS
ILDHPPSPMDTSDLGFSPHSTALDFGDPTLDSMDWLDISMVGSASGGSGGSGAGGRGGGG
GGGGAGEGVGGTSLAPLAPHTPPSVFSADFLDSTDLQLHWESCL
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagaaagcattgctgtcagcaggtctctccgtcaccctggcaacacaacaacca
cagataggggaggagccaagtcctggcagtatggaggtgaccgggacgccaggctcagcc
ccgagccctcagagcgaggcagtgaccaatgagcttcaggagctgtcccttcagcctgct
cccaacctgctgcctctacaggagcgcaagaatgtcctccagctcaaactccagcagaga
cgaacacgagaggaactggtcagccaagggatcatgccaccactgaaaagcccggcagcc
tttcacgaacagcggaggagtctggagcgagcaaggaccgaggactatctgaagaggaag
atccggagtcgccccgagcgctccgagctggtcaggatgcacattctggaggagacgtcg
gcagagccgtccctgcaggccaagcagctgcagctgaagcgagcgcgactggccgacgac
ctcaacgataagatctcccacagaccgggtcccatcgaactggttcacaagaacatcctg
tctgtcagctgccccctgcagcactcactgctggattctccaaagggagccgggggagag
agttcgtctttagatgaagacagcagtgacgctctgtcaccggaccagctgaccaatcac
gactctcccctgagtgccgtccctcagctgtccccctctgatgcactcacccagaatggg
gacatgtctcccacacagttccttactcagccccctcctccacctcctccaccacctcct
cctcaggtgaacgggtcagactcctccccacccccaaaattgacaaatggaacgacgatg
gtgacctcagcaagcccccgctcctccaccggacaggtcaagcagtctcaggctaagacg
agttcggatcgtcctccacagagatctaaaaaaccaaaggacaacaaacccaaggtgaag
aagctgaagtaccaccagtacatccccccggaccagaaggcagacaaggagcgtccgcct
cagatggactcgtcctacgcgaagctcctccagcagcagcagctcttcctgcagctgcag
atcctcagccagcaacagcagcactacaactaccacaccatcctgcccgcccctcccaag
cctccaaccgagcagccgcccacaaccaactctggcccttccccctcccgcagcgttccc
acgacaaccaccacgggcccttccaatcagagtgggactgcccgtcagagccaaactgca
gtgggaggagccaaacccatcactctgccagccaacctggatgagttcaaagtcgctgag
ctgaaacaggaactgaaattgcgtggtttgaccgtctcaggcaccaaaaacgatctaatt
gagaggctgcgaaactatcaggagcaaaatggcggcaccacagcggttttgaaaaatggc
atgttacagcccagcccacagggcgctaactcagcctccagcaccgtcacatcctctcca
accacaaccaccggccctgatcaccagtcagcagagggtgggtttaagttagctttgtcc
tcattagctcatgcggttcctgggagagtcatgcgttttggcagcaccagctccagccct
cctgtgtcgcccactccgtctgagaggtcattggccgggatgagtccagatgagacgagc
tgtaatggagacatgtttggagagatggtgagctctcccttgacccaactcaccctgcac
ccatctcctcagcacccatcaaacatctctccgctctcacagcctctccccaaagtcaaa
gaggagatccagagcccatgcagcctgtccaggtcttcatctgcctcaggccagtctcca
gagctgccaggggtagccatggacgcgtcctccatggacaaagaccagatgctccaggag
aaggacaaacagatcgaggagttgaccaggatgctgaggcagaagcagaggcttgtggag
accctgaggtcccagctggagcagggcaagatggcaggcggagtcgtgctggagaaggaa
ggaagcgagaagggcaaacagtcctcagaggttaaatttcaaactctaataaaagcctcg
gccattcagcccccgactctccctaacggcattgtggtgaaggtgaagaaggaggtggag
cccgaggaagaaatggagggagtaacggaggaggcgcaggcgaagaagctggccccgccg
atgcagtgctctcaggagactctgctcaggctgcagcagattcagcggctgcaggtccaa
caagctgaacagcagaaacggcagctacaacaacccaaacagcagcagagccaggtgcag
ctgcagaaagtctctgaggcgaaatcaacccctcaaaaacaacagcagcaaaagaaggaa
gctcaaatcctgctccatcagcagcagcagctccagcagctcatcatacagcaaacccaa
cagaagcagctccaggcccagcagaagttagcgcagcagaaactcacgcaacagaagctg
gtgcagcagaaccagctcaaacaaacccaggggcaagttcaacagagccagcagaagaac
caggttcagctgaagcaggttcaggtgcagatccagaaccagacggtggcgagccagaag
cccgcggcgaaccaaacccagcagaggaaacagctgaaggctcatcagaggcagaaacaa
cagacggcagccgtcgccacacagcaggtgactccggtcttcatcaaccagcagaacggc
actcagatccacactcaggccatctcattagacctcctcaaggctaacggcacgcccacg
ctggtcaccgacagcaacggcaaccactacctgatcgctctcaccagccacaccgcagac
ggacagaatggcgtgtcctcgttggccaaaaccaacggacgcatcacgctgcagagattg
cagtcgactccgagtaaactccccagcactgagagccaatcaaaagagcagacagaggcc
gagcctgcgagccagccaatcaaaaagggacagaaggcggggctgcacctggacaccaac
ggcgttccacaacccaacctgtccgtcaccgctccgcccagcctgcagccgttcttcgac
gacatgtcggacagcgaaagccaaagcaacttaatctcatctctgaaggagaatggcgtc
aatagtcagcagatggacgacctgtttgacatcctgctcaagagcggaggtaaataaact
gctgtaaacactgagagagacgtcatgagtctgtcgtctgcagcgctgatgagatttttc
tctctttgtcctcctccagaaatccccggcttcaaggccaacccagacccatccctcgcc
cctctgcactctgacccgccctccccatcttctcccccgtctcccctccacctctcccca
cccacccccacagagtccctcatctccccgcagccctctgtgggagagccctgcacaggc
agcggacgcctggaggacttcctggagagcaccacgggtgcccccctgctgggcgtggag
cccgacggcggcctgacgctgatcgacgacctgcacagccaaatgctgagcacgcccagc
atcctggaccaccctccctcccccatggacacgtccgacctgggcttctccccccattct
acagcgttggactttggcgaccccaccttggacagcatggactggctggatatttccatg
gtggggagcgccagcggaggaagtgggggcagtggcgcaggagggagaggaggaggaggt
ggaggtgggggcgccggcgaaggagttgggggcacaagtctggccccgctggcgccacac
actccgccgagcgtcttctcggccgattttctggacagcacggacctgcagctgcactgg
gagtcatgcctgtag
DBGET
integrated database retrieval system
