Lates calcarifer (barramundi perch): 108872995
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Entry
108872995 CDS
T04895
Symbol
abcb6a
Name
(RefSeq) ATP-binding cassette sub-family B member 6 isoform X2
KO
K05661
ATP-binding cassette, subfamily B (MDR/TAP), member 6
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108872995 (abcb6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108872995 (abcb6a)
Transporters [BR:
lcf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB6, 7 subgroups
108872995 (abcb6a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
MTABC_N
ABC_membrane
ABC_tran
SMC_N
AAA
AAA_16
AAA_21
AAA_22
AAA_29
RsgA_GTPase
AAA_30
Acyl-CoA_dh_1
SbcC_Walker_B
Zeta_toxin
nSTAND3
AAA_28
AAA_23
DUF815
AAA_15
AAA_33
Motif
Other DBs
NCBI-GeneID:
108872995
NCBI-ProteinID:
XP_018516494
UniProt:
A0AAJ7L9A6
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All DBs
Position
LG7_2:complement(6943030..6950732)
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AA seq
852 aa
AA seq
DB search
MVFMQSYCEANSSISHTWVDEGIAPCFYFTLVSTILLTLAFFLGTIHCIFYQKYGTAMEP
KFIPRSRLYGFQQAISILLLIQFLGEMVWRAAGGGELPGYVVLYGCFSVLGWAWAIALLR
VERRRVLVMDRTRGHSAALLLFWALAFSAENLAFVSWYSPRWWWGLENNQQQVQFALWLM
RYIGTGLLFFIGLKAPGLPRRPYMLLINEDERDVENSGQSLLGTTEENQSTWQGFRKKVH
LLLPYMWPRGNIFLQLLVLLCLVLLGVERAINVFVPIYYKNIVNDLTDGSSWRTVATTVF
IYVLLKFLQGGGAGASGFVSNMRSFLWIRVQQFTNRVVQVRLFAHLHSLSLRWHLSRKTG
DVLRSIDRGTSSINSLLSYIVFSIFPTIADIVISIIYFITYFNAWFGLIVFICMVLYLTL
TIIITEWRTKFRRDMNQQDNNAKSKAVDSLLNFETVKYYNAENYEVSRFEDTILKYQVSE
WKTQASLAFLNQTQNIIIGSGLLAGSLLCAYFVTEGKFQVGDFVLFGTYIIQLYTPLNWF
GTYYRIIQKSFIDMENMFTLFEEEEEVKDEVNAGNLLYKLGKVEFENVYFSYISGKEILQ
DVSFTVLPGQTVALVGPSGSGKSTIIRLLFRFYNIQGGCIRIDGQDISKVKQTSLRAHIG
VVPQDTVLFNDNIRDNIRYGRITASDQEVEEAAIAADIHDKIMTFPEGYDTQVGERGLKL
SGGEKQRVAIARTILKAPQIILLDEATSALDTQTERNIQASLAKVCANRTTVVVAHRLST
IIGADQILVINEGRIAERGRHEELLLKGGLYADMWMQQQQTQDSDSSSDTEAKDRSSEKL
QPPSTSSDHHGH
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttatgcagagctactgcgaagccaattcctccatttcccacacctgggtggat
gaaggtatcgccccctgcttctacttcacactagtctccaccatcctgctcaccctcgcc
ttcttcctcggcaccatccactgcatattctaccagaaatatggcacagcaatggagccc
aagttcatcccacgctctcgcctctacgggttccagcaggccatctctatccttctccta
atccagtttctgggtgagatggtgtggcgggccgcaggcggaggagagctcccgggctat
gtggtgctgtacggctgcttctccgtactgggctgggcctgggccatagccctgctcagg
gtggagagacgcagggtcctcgtgatggaccggacaaggggacacagcgcagccctgctg
ctgttctgggctctggctttctcggctgagaacttggctttcgtctcctggtacagtcct
cgctggtggtgggggctggagaacaatcaacagcaggtgcagtttgccctgtggctgatg
cgctacattggcaccgggctgctcttcttcattggtctcaaagctccggggttgccacgg
agaccatacatgctgctaataaacgaagatgagcgtgatgtagagaacagtggacagagc
ctgttgggcacaacagaagagaaccagtccacctggcagggtttcagaaagaaggtccat
ctgcttcttccctacatgtggcccagaggcaacatcttcctccagctgctggtcctcctc
tgtttagtgctgctgggagtcgagagggctattaatgtctttgttcccatttactacaag
aatattgtgaatgatctgactgatggcagcagctggcgcactgtggccactacagtgttt
atttatgtcttgctcaagttcctgcagggcggaggggcaggcgcctcagggtttgtcagc
aacatgcgctctttcctgtggatccgggtgcagcagttcaccaaccgcgtggttcaggtg
cgtctgtttgcccacctgcactccctctccctgcgctggcatctgagtcgcaaaaccggc
gacgtactaagaagcatcgaccgtggaacttcctccattaacagcttgctcagctacata
gtgttcagtatcttcccaaccatcgccgatattgtcatctccatcatctacttcatcacg
tatttcaacgcctggttcggccttatcgtcttcatctgcatggtcctttatctcactttg
accatcatcatcactgaatggaggaccaagttcagacgagacatgaatcagcaggacaac
aacgccaagtccaaggctgtggactccttgttaaactttgagacggtaaaatactacaat
gcagagaactatgaggtcagccgttttgaggataccatcttaaaatatcaggtgtctgag
tggaaaacccaggcgtctttggctttcctcaaccaaacacagaacatcatcatcggatca
ggcctgctagctggctccctgctctgtgcctactttgtgactgaagggaagtttcaggtt
ggagattttgttctcttcggtacctacatcatccagctgtacaccccactcaactggttt
ggaacctactacagaatcatccagaaatccttcattgacatggaaaacatgttcacacta
tttgaagaagaagaagaggtgaaagatgaagtaaacgcagggaatcttctctacaaacta
ggaaaagtggagtttgagaatgtttacttcagctacataagtggtaaagagattctccag
gacgtttccttcactgtgctgccaggacaaacagtcgccctggttggaccatcaggatct
gggaagagcaccatcattagactactattccgtttctataacattcagggaggctgcatt
cgcatcgatggccaggatatatcaaaagtgaaacaaacatctctgcgagctcatatcggc
gtggttccccaggatactgtgcttttcaacgacaacatccgtgataatattcgctacggt
cgcatcactgccagtgatcaggaggtggaggaggctgccatagctgctgatatccatgat
aaaatcatgaccttccctgaaggttatgatacacaggtgggtgaaagaggtctgaagctg
agtggaggagagaagcagagggtggccatcgccagaacaatcctcaaagcaccacagatc
atcctgctggatgaggccacatctgcactggacacacaaacagaacgcaacatccaggcc
tcactggctaaagtctgtgccaatcgtacaacagtcgttgtagctcacagattgtccacc
atcattggagcagaccagatcctggttataaatgagggccggatagctgagcgaggacga
catgaggaattactactaaagggaggcctgtacgcagatatgtggatgcagcagcagcag
actcaggactcagactcctcatcagacactgaagccaaagatcgttcgtctgagaaacta
caaccaccgtcgacttcttcagaccaccacggccactga
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