Lates calcarifer (barramundi perch): 108873026
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Entry
108873026 CDS
T04895
Symbol
obsl1a
Name
(RefSeq) obscurin-like protein 1a
KO
K19574
obscurin-like protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108873026 (obsl1a)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
108873026 (obsl1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
Ig_MYOM1
VEGFR1-3_N_Ig-like
Izumo-Ig
Ig_6
Ig_4
C2-set_2
BiPBP_C
Receptor_2B4
VEGFR-1-like_Ig-like
Ig_C17orf99
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
108873026
NCBI-ProteinID:
XP_018516550
UniProt:
A0A4W6F3G2
LinkDB
All DBs
Position
LG7_2:complement(4336452..4350279)
Genome browser
AA seq
2215 aa
AA seq
DB search
MDIFGGAPRVLGYPRPVVAQCGTDATLKCQIGGDPRPDVIWERKNVQILSEGRYKLSEEG
KAYLLTITGVTQQDAGQYICKARNSIGETYAAASLKVEGEAQPQGGEQRQLGVNGVRQPM
MENGETEGHMNGYCKVQNGEHRKRNGEEINGEHKWSSKLSEKREEVDLTSDDKPRFLIKP
LSLRVDRGEDAAFSCKIWGTPLPEVTWEKDGKKLNDIFESSHFSVSNQDGGWFQLKIYRT
RMPDKGVYTCKAMNCNGEALAGAVLLVEPVPEREEGKMSSNGHTNSQWSPRHRGGRLSLS
RIKEEQPVNPSTAKKFAVAEGKHAKFRCFVTGKPKPEIIWKKDGVPLEPGRRHLIFEDRE
GYYTLKVLYCKEQDTGLYVCAASNALGNTLSAVHLSVKGPAVRFRRPLKDVEVKERDVAV
LECEVPDESLPAAWYLEDQRLMPSSKYGMEQKGTKRRLTIHDVGTDDDGVYLCEMPDGAK
SIAELSVKGTIVRKLPRKLEVLEGENAAFCVEVEDDDMEVHWFKDGLKLHETHQTILKSF
GKTHILVFVNVAHHDSGVVTFVAGRSKTSSRLKVKASRHSPPICPVGVKMDVDRPNSALL
TWVPAPNSPTSTRSIFVLERQEVGSQEWQKVFTSETATSAEVTGDTVPCEGNYRFRVCCI
NKYGRSGHVEFPKVVHLAPGPKIRSHLQACEVTEGEDARFSIELSASMVGTWFLNSAQLQ
HGGRYLIKQSQTQHSLVISDTRAKEDTAEVTFIANGVRDSAVLKVKPAVIKFSPLSELDS
KKKVETGDAIVLYCEVSHPFAKVSWFKDGEELQMTDGLNIQSDGNMRRIVIQSADASHSG
VYTCETLGDVIKFNVNVGGPPVEFSPVPEEERHKSSMELDPVVLICHVSREDAEVTWYKE
GCEIWPSDNITLQAEGTVRRLIIRSAEISDAGSYTCQAGNNSMEFTVNVREPPVMIVEPK
DDVVMESYISEEIHLQCELSRSSGKVQWFKDGQEVEESDNIQLISEGPYRRLTIPCGSVE
DGGEYVCKTDGDSVFFQLTVTEPPVRIVSPTETELELTHLAPERLELSCVISQSDAPVRW
YRDGLEVEEGPNLILEVDGAQRRLVIPTTTVDDTGEYICDTEDDSVAFLVTITEPPVTLT
RPKNTPDKLQSFAGKPIVMEIEVSRPSAEVRWWLNGKEIEENSNVTITEDGLIRRLTIHV
PTPQDSGKYTCDAVDDKIDFQVKISEPPVKILRKSEIKTNLKSLISDDIVLECELSRANA
VAKWYKDGCRIEDDERLCEEEEGSFRSLVILNAELRDSGEYFLDVGDDSISFQVTVEEPP
VTIVGNSIDPDYQDMVAGDDLILACEVSRANAPVQWYCNDKLLTSDSRTYIESYGTLRKI
IISNVQPSDSGKYMCDAVNDKMISVIRVQEPPVMFVNKEDDIVVTGYEAESVTLTSYVSK
ESALVRWLKDWTPVEGERYQALMEGHKRTLTINPLRRSDAGEYTCDVNTDQIHFSLLVKE
MRIKFVKPLRDTVAHADGMVTLRCEVCKPKADVQWLKNGVEVVASRRFTIRADGVERSLT
IHRLSREDAGEYTCESRDDRTAASLRVEMPRVVEFLTELHNTTVLEGEDATFKCVVSPED
VQLVWLMDNEPITLGNRFQATQNGLCHTLVIKKCQMLDCSRITAEAEGQLSKASLKVQET
QVMFTKKMEAVMAEEFGEATLETEISLETGEVQWMRQGVVIQSGPRHTLAQNGCKRSLTI
HNLALSDRGTYRCETLHDRTQVKLNVEPRKISIRKGLIDQETFERETASFEVELSHTDVE
GIWQKDGIRVKPNNQWRVSTNGLVHGLTLSNLTLEDTGTIVFSAEGVRTSARLTVKETPV
SILRVLSDVRVEEELPATLECEFSRQNVEVKWLKNGTELKPGKNCRIYSMGRKRFCQILQ
CSRADSGTYTCDTGEINTSCSLEVYEHELEIVQDLEDLYIQEDQNAVFMCEVSLEDVTGE
WYKDGHKIRPTSTIKIRTEGTKHFLLMCNVKAEDAGEIRFVARDIESTAYLEVEELPVSI
VKPLRDRTALEKHRVILECTVSSPRCSATWYKGREELVSSDRVDILADGCSHKLVIQQVA
VEDEGTYRIEIGEHTSKAKLMVEAQALVMVKELEDVEVMESEPAAFQCEVSVAISKPPIW
TLNGETLQAGPSVRLENHGTVHKLTLKNTSVDMSGIVKFTMGKAKSSATLSVMAE
NT seq
6648 nt
NT seq
+upstream
nt +downstream
nt
atggatatttttggaggtgctccacgtgttttgggctacccacgccctgtagtggcacag
tgtggcacagatgccacactgaagtgccaaattggtggagaccctcgtcctgatgtgatc
tgggagcgtaaaaatgtccagatcttgtctgagggacgctacaagctctcagaggaggga
aaagcgtacctgctcaccattactggagtgactcagcaagatgctggccagtacatatgc
aaggctagaaatagtataggtgaaacatatgcagcagcctccctgaaagtggaaggagag
gcccaaccacagggaggggagcaaaggcaattaggggtcaatggtgtgaggcaaccaatg
atggaaaatggagaaactgaaggacacatgaatggctactgcaaagtgcaaaatggtgaa
cacaggaaaagaaatggagaggagataaatggagaacacaaatggagcagcaagttaagt
gaaaaaagagaagaggttgatttgacatctgatgataagccaagattcctcatcaagccc
ctctctctgcgtgtagatagaggagaagatgctgccttctcctgcaaaatctggggcact
cctttgccagaggtgacatgggagaaagatgggaagaagctgaatgacatctttgaaagt
tcacactttagtgtgagcaatcaagatggtggctggttccagctcaagatctacaggaca
cgcatgccagacaaaggtgtctacacctgcaaggccatgaactgcaatggtgaggccttg
gccggcgctgtccttcttgttgagcctgtaccagagcgagaggagggtaaaatgtcctca
aatggtcataccaatagtcaatggtccccaaggcacaggggtgggcgactcagtttgtcg
aggatcaaagaagagcaacctgtcaacccatctacagctaagaagtttgcagtggcagag
gggaaacacgcaaagtttcgctgctttgtaacagggaaaccgaaacccgagatcatctgg
aagaaagacggggttccccttgagcccgggagacgacacttgatatttgaggacagagaa
ggttactacactctaaaggttctgtactgtaaagagcaggatacagggctgtatgtttgt
gcagcatcaaacgctcttggaaacaccctcagtgctgttcacctgtctgtcaaaggccca
gctgtgcggttcaggcgtccattaaaagatgtggaagtgaaggagcgggatgttgctgtg
ttggagtgcgaggtgcctgatgagtcgctcccagccgcctggtacctggaggaccagagg
ctgatgcccagcagtaaatatgggatggagcagaagggaaccaaacgaagactcaccatc
catgatgtggggacagatgacgatggagtgtatctctgtgagatgcctgatggagcaaag
agcattgcagagctatcagttaaaggtactattgttcgtaaacttcctcggaagctggag
gtcctcgagggagagaatgcggcgttctgcgtggaggtggaggatgacgacatggaggtc
cactggttcaaagatggtctgaagctacatgaaacacaccagacgatcctcaagtctttt
ggcaaaactcacattctggtctttgtcaacgtggcccatcatgactcaggggtagtgacc
tttgtcgcagggagatccaagacctcatcacgcctcaaggtcaaagcctcaagacacagt
ccccctatctgtcctgtgggtgtcaaaatggatgtagatcgacccaacagtgccctcctc
acctgggttcctgctcccaacagcccgacatccacccgctccatcttcgtgctggagaga
caagaagtgggctcccaggagtggcagaaggttttcacctcagagaccgccacctcagct
gaggtcactggtgacaccgtgccatgtgaaggcaactaccgcttccgagtctgctgcatc
aacaagtacggacgaagtggtcatgtggagtttcccaaagtcgtccatctggctcctggg
cccaaaattcgcagtcaccttcaagcctgtgaggtaacggagggagaggatgctcgcttc
tctatcgaactgtctgcctcaatggttggaacctggtttctgaacagtgctcaactgcag
catggtgggcgatacttgataaaacagtctcaaacacagcactccttggttatcagtgac
actcgtgctaaagaggacacagcagaggtcacgttcatagccaatggagtccgggattca
gctgtgctcaaagttaaacctgctgtgataaaattcagccctctgtcagaattagacagc
aaaaagaaggtggagactggtgatgctattgttctctactgtgaagtctcccaccccttt
gcaaaagtatcctggtttaaagatggcgaggagctccagatgactgatggcctcaacatc
caatcagatgggaacatgagaaggattgtgatccagtcagctgatgcatctcactctgga
gtttatacatgtgaaaccttgggggatgttatcaaattcaatgtgaatgttggaggtcct
cctgtggagttcagtccggtcccagaggaggagcgccataagagcagcatggagttggac
cctgtggtgctgatctgccatgtttccagagaggatgctgaagtcacctggtataaggaa
ggctgtgagatctggcccagtgataatataactctgcaggcagagggaactgtgaggagg
ttaataatccgctctgcagaaatctcagatgctggcagctacacctgccaggcaggaaac
aacagcatggagttcactgtcaatgtcagagagcctccagtgatgattgtggaaccaaag
gatgatgtcgtgatggaaagctacatctcagaggagatccacctacagtgtgaactttca
cgctccagtgggaaggtgcagtggttcaaggatggtcaggaggtggaggagagtgacaac
atccagctgatatctgagggtccttacaggaggctgaccatcccctgcggatcagtggag
gatggtggagagtatgtctgcaaaacagatggagactctgtcttcttccagcttactgtc
acagagccaccagtccgaattgtttcccccactgaaacagagctggaactgacccattta
gccccagagaggctggagctcagctgtgtgatctcccagtcagatgcccctgtccgctgg
tacagagatggcttggaggtagaagagggccctaatttgatcctggaggtggatggggcc
cagcgcaggttagttataccgacgaccactgtggacgacacaggggagtacatatgtgac
actgaagatgactctgtggcgttcctggtaactatcacagagccaccagtgacacttacc
cgccccaaaaacacacctgacaaactgcagagctttgccggcaaaccaattgtgatggag
atcgaggtgtcccggccaagtgcagaagtcaggtggtggctgaatggcaaagaaatagag
gagaacagtaacgtcaccatcacagaggacggactcatccggcgtctgaccatccatgtt
cctaccccacaagattctggaaaatatacctgcgacgctgttgatgataaaattgatttc
caggtcaaaatttcagagcctccagtgaagatcttaaggaagtcagagatcaagacaaat
ctaaaatccctgatttctgatgacattgtgctggagtgtgaactctccagagccaatgct
gtcgccaaatggtacaaggatggctgtcgtattgaggacgatgaaaggttatgtgaagag
gaagaaggctctttccgctcgctggtcatcctaaatgctgagctcagagactcaggagag
tacttcctggatgttggagatgacagcatcagcttccaggttacagtggaagagcctcca
gtgaccattgtaggaaactcaattgaccctgactaccaggacatggtggcaggtgatgac
ctgatcctggcctgtgaggtgtcccgtgccaacgcccccgtccagtggtactgcaatgac
aagctgctcaccagtgactcccgtacctacatagagagctatgggactctaaggaaaatt
atcatctcaaatgtccagccctcagattctgggaagtacatgtgtgacgctgtgaatgac
aagatgatcagtgtgatccgggttcaagaacctccagttatgtttgtgaacaaggaggat
gacatcgttgtgacgggttacgaggcagagagtgtgaccttaacgagctatgtgtccaag
gaaagtgctctagtgcgttggctgaaagactggacgcctgttgaaggtgaacgctaccaa
gcactcatggagggccataaacgcaccctcaccatcaaccctttgaggcgctctgatgct
ggcgagtacacctgcgatgtcaacacagaccagatccacttcagcctgctggttaaagaa
atgagaatcaagtttgtgaagccactcagggacactgtggcccatgctgatggtatggtg
acccttcgctgtgaagtgtgcaagccaaaagcagacgtccagtggctgaagaatggtgtg
gaggtggttgcaagcaggaggttcaccattcgggcagatggagtggagcgaagcttgacc
atccaccgtttaagcagagaggatgctggggagtacacctgcgagtccagagatgaccgc
actgcggcttcgctgagagtagagatgcctcgagtggtggagtttctcacagagctccac
aacaccactgtgcttgagggagaagatgccactttcaagtgtgtggtttcccctgaggat
gttcagttggtctggctcatggacaacgagcctatcaccctgggtaatcgtttccaggca
acacagaatggcctatgccacacgttggtgattaagaagtgccagatgttggactgttca
aggattacagcagaggcagagggacaattgagcaaagccagcctcaaagttcaggagact
caggtcatgtttactaagaaaatggaggctgtcatggcagaagagtttggagaagccacc
ctggaaacagagatcagcctggagacaggcgaggtccagtggatgaggcaaggggtggtc
atccagtccggtccccgacacacattggcccagaacggctgtaaacgcagtctgaccatc
cacaacctggctctgtcagaccggggaacctaccgctgcgagactctgcatgaccggaca
caagtcaaactcaatgtagaaccccgtaaaatctccatccgtaaaggcctgatagaccaa
gaaacctttgaacgagagaccgcctcctttgaggtggagctctcccacacagatgtggag
ggaatttggcagaaggacggcattcgggtgaaaccaaacaaccagtggcgggtgagcacc
aatgggctggttcacggtctcaccttgtccaacctcactctggaggacacaggtaccatt
gtcttctctgctgaaggggtgcgcacttctgccagactcacagtcaaagagacaccagta
tctattttgagagtgctgtctgatgtccgtgtggaggaggaacttcctgccactctggag
tgtgaattctccagacaaaatgttgaggtgaaatggcttaagaatgggacggagcttaag
cctgggaagaactgtcggatttactccatgggtcggaaacggttctgtcagatcctgcag
tgttcccgggctgattctggcacttacacatgtgacacgggggaaattaacacttcctgt
tcactggaggtgtatgagcatgagttggagatagtgcaggatctggaggatctctatatt
caggaggaccagaatgctgtcttcatgtgtgaggtttctctggaggatgtgactggagag
tggtacaaagatggccacaagatccggccgaccagcaccatcaagatccgcactgaaggg
accaaacacttcctgctgatgtgtaatgtcaaagctgaagatgctggagaaatccgcttt
gtagccagagacattgaatctacggcttaccttgaggtagaagagcttccagtttccatt
gtcaaacccctgcgtgaccgaacagccctggaaaagcatcgggtgatcctcgagtgcacc
gtttcctcacctcgctgcagcgctacctggtacaaaggcagggaggagctggtttcgtca
gatcgagtggacattttggctgatggctgttctcataaactagtgatccaacaggtagct
gtggaggatgagggcacctacagaatcgagattggggagcacacatctaaagccaagctc
atggtggaagcccaggctcttgtgatggtcaaagagcttgaggacgtggaggtgatggag
tctgagccagccgctttccagtgcgaggtgtctgtcgccataagcaagcctcccatttgg
actctgaatggagaaacccttcaggcgggcccctctgtccggctggaaaaccacgggacg
gtccacaaactcaccctgaaaaacaccagtgtggacatgagcgggatagtcaagtttacc
atgggcaaggccaagagcagcgccacgctcagtgttatggcagagtag
DBGET
integrated database retrieval system
