Lates calcarifer (barramundi perch): 108873046
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Entry
108873046 CDS
T04895
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2-like
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108873046
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108873046
Ion channels [BR:
lcf04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
108873046
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
108873046
NCBI-ProteinID:
XP_050922075
UniProt:
A0AAJ8DK55
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Position
LG7_2:2654470..2662350
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AA seq
576 aa
AA seq
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MERRGDLTPLLCCCCWILINCALAEDWTRVHTEDELFRSLFGGYSKWTRPARNITDVVIV
KFGLSIAQLIDVDEKNQMMTTNVWLKQEWTDYKLQWTPSDFDNVTSIRVPSELIWVPDIV
LYNNADGEFAVTHMTKAQLFHTGRVRWVPPAIYKSSCSIDVTFFPFDQQSCKMKFGSWTY
DRAKIDLEPFENTVDLKDYWESGEWAIVNAVGTYNTKKYDCCHEIYPDITYYFVIRRLPL
FYTINLIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIP
LIGEYLLFTMIFVTLSIVITVFVLNVHHRSSATHTMPRWVRRLFLSAVPRWLCMKRPHHG
LKPVSLVWLRVNIFLKPNPNSLCFLRRRHLTDKLLPVRTPGPAHITSTWITESSIDLHGY
RGGDGCHSSHELNSLDTRDKIHYCDLHGHPHTDNLARLGVKTRISPLSPPSPPSLGYTLL
PQRHSTLSLDWDTPTSERGSIQSPSASVLSPAVVSALEGVTYIAEHLRAEDADFSVKEDW
KYVAMVVDRIFLWMFIIVCLLGTVGLFLPPWLSGMI
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggagcggagaggagacctgacaccgctgctgtgctgctgctgctggatcctcatcaac
tgcgcgctggctgaagactggactcgtgtccacactgaggacgagctcttcaggagcttg
ttcggaggctacagcaagtggacacgtccggcacgaaacatcaccgacgtggtcatcgtc
aagtttggcctctccatcgcacagctgatagacgtggatgagaaaaatcagatgatgacg
accaacgtgtggttgaaacaggaatggacagactataagctgcagtggactccctccgac
ttcgacaacgtgacgtccatcagagttccctctgagctcatctgggtgcccgacattgtg
ctgtacaacaatgcagacggagagttcgccgtcacccacatgacaaaggcccagctcttc
cacaccggtcgtgtccgctgggtgcccccggccatctacaagtcgtcctgctccatcgac
gtcaccttcttccccttcgaccagcagagctgcaaaatgaagtttggctcctggacgtac
gaccgagccaagatcgacctggagcccttcgagaacaccgtggacctgaaggattactgg
gagagcggagagtgggcgattgtcaacgccgtgggcacctataacaccaagaaatacgac
tgctgccacgagatctaccctgacatcacctactattttgtcatccgccgcctgccgttg
ttctacaccatcaacctcatcatcccctgcctcctcatctcctgcctgaccgtcctggtt
ttctaccttccatcggactgcggtgagaaaatcacgctgtgcatctctgtgctgctgtcg
ctcaccgtcttcctgctgctaatcacagagatcatcccgtccacgtccctggtcatacct
ctgatcggggagtacctgctcttcaccatgatcttcgtcacgctgtcaatcgtcatcacc
gtgttcgtgctgaacgtccaccaccggtcgtctgcgactcacaccatgcctcgatgggtt
cggaggcttttcctgtctgcggtgccacgttggctgtgcatgaagcgtccacatcatggc
ctcaagcctgtcagtttggtttggctcagggttaacatattcttgaaaccaaacccaaac
tcactttgttttctcaggcggcgccacctgactgataaactcctccccgtccggactcct
ggccccgcccacatcacatccacctggatcacagagtcgagcatcgatctccatggatac
cggggtggtgacggttgccacagcagccacgagctgaactccttggataccagagataaa
atccactactgcgaccttcacggtcacccacacactgacaacctggcgaggttaggggtg
aagacgaggatttctcccctctctcctccttcccctccatctcttggttacaccctcctc
ccgcagagacactccacactcagcttggactgggacacccctacttcggagcgtggttcg
atccagagcccatcggcctctgttctgtctcctgcagtggtatcagccctggagggggtc
acctacatcgcagagcatctgagagcagaggacgcagacttttcagtgaaggaggactgg
aagtatgttgccatggttgtggaccggatcttcctgtggatgttcattatcgtgtgtctg
ctgggaacagtgggactcttcctgcctccgtggctctctgggatgatttag
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