Lates calcarifer (barramundi perch): 108873094
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Entry
108873094 CDS
T04895
Name
(RefSeq) actin-related protein 3
KO
K18584
actin-related protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
lcf04530
Tight junction
lcf04810
Regulation of actin cytoskeleton
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108873094
09144 Cellular community - eukaryotes
04530 Tight junction
108873094
09142 Cell motility
04810 Regulation of actin cytoskeleton
108873094
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108873094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108873094
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108873094
04147 Exosome [BR:
lcf04147
]
108873094
Membrane trafficking [BR:
lcf04131
]
Others
Actin-binding proteins
Arp2/3 complex
108873094
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
108873094
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108873094
Exosomal proteins of other body fluids (saliva and urine)
108873094
Exosomal proteins of bladder cancer cells
108873094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
MreB_Mbl
FtsA
ALP_N
Robl_LC7
Motif
Other DBs
NCBI-GeneID:
108873094
NCBI-ProteinID:
XP_018516736
UniProt:
A0A4W6D7L7
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Position
LG7_2:3179280..3185639
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AA seq
418 aa
AA seq
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MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRMMKGVDDLDF
FIGDEAIDKPSYATKWPIRHGIVEDWDLMERFMEQIIFKYLRAEPEDHYFLLTEPPLNTP
ENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPV
AEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAVKERFSYVCPDLVK
EFNKYDTDGSKWIKQYTGVNAITKKEFTIDVGYERFLGPEIFFHPEFANPDFTQPISEVV
DEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKMSEELSGGKLKP
KPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggctggtcggctgccggcttgtgttgttgactgtggcacagggtacacaaagcttggt
tatgcaggaaacacagaaccacagttcatcataccttcatgtattgcaatcaaagaatct
gccaaggtcggggaccaggcccagcgcaggatgatgaagggagttgatgacctggacttc
ttcatcggggacgaagccatcgacaaaccatcatatgcaacaaagtggcccattcgtcac
gggatagtggaagactgggacctgatggagagatttatggagcagatcatcttcaagtat
ctgcgggcagaacctgaagaccattactttctcttgacagagcctccactcaacacacca
gaaaacagagagtacacagcagagatcatgtttgagtccttcaacgtcccgggtctttac
atcgctgttcaggctgtcttggcgctggctgcctcctggacatccagacaggtcggagaa
cggacactgacagggactgtgattgacagtggagacggagtcacacacgtcatccccgtg
gctgaaggctacgtcatcggtagctgcattaagcacattcccatcgctggtcgagacatc
acctacttcatccaacagctgctgagggaaagagaggtggggatacctccggaacagtct
ctggagacggctaaagctgtcaaggagcggttcagctatgtctgccctgaccttgtgaaa
gagtttaacaagtacgacacagacggctccaagtggatcaaacagtacacaggcgtcaac
gccatcaccaagaaggagttcaccatcgatgtcggctacgaacgcttcctcggccctgag
atctttttccatcctgagtttgccaacccagatttcacccagccaatctcagaggtggtg
gatgaagtcatccagaactgtcccatcgacgtcaggcgtccactgtacaagaacattgtg
ctctccggaggctccaccatgttcagggacttcggcagacgcctgcagagggacctgaag
aggactgtggacgcacgtctgaaaatgagcgaagagctgagcggcggcaagttgaagccc
aagcccattgatgtgcaagtcatcactcatcacatgcagaggtacgctgtctggttcgga
ggatcaatgctggcatctactcctgagttttaccaagtgtgccacactaagaaagattat
gaagagatcgggccgagcatctgccgccacaaccccgtattcggagtcatgtcttag
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