Lates calcarifer (barramundi perch): 108873126
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Entry
108873126 CDS
T04895
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108873126
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
108873126
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos2
Motif
Other DBs
NCBI-GeneID:
108873126
NCBI-ProteinID:
XP_018516765
UniProt:
A0AAJ7L8K9
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Position
LG7_2:1191398..1195807
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AA seq
308 aa
AA seq
DB search
MEKIGEEGEESPERNPSSSTANRQEGEENTPRHSVNMAEGASCSDETRETLSEDDDNKLS
LITWNVDGLDGEEQPERARGLCSYLTEYSPDVVLLQELVQPYVRFLHKHLGVDYTFIEGG
KEHYFTGMMLKKSRVTLLDSEIVAYPTTQMLRNLLVAQVLFRGQKFCLMTSHFESCKANA
EERMRQLQLVMRKMSEAPDDVTVLFGGDTNLRAAEVAEVGLPSSVCDVWEQLGRPLCCRF
TWDTKYNTNNNIPVNRHFRFDRVYLRRASKDGVPQVDPDSMGLVGLEKLKCGCFTSDHWG
IYCRFSAE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaatcggcgaagaaggagaagagtcgccagaaagaaacccctccagctccaca
gcaaacagacaggagggtgaggagaatacaccaagacacagtgttaatatggctgaaggt
gcctcctgcagcgatgaaaccagagaaactctatcagaggacgatgataacaaactgtct
ctgatcacatggaatgtggacggactggatggagaggagcagccagagagagccagaggt
ctctgctcttatttaaccgaatactctcctgacgtggtgcttcttcaggagctcgtccaa
ccctacgtccgcttcttgcacaaacatctgggtgtcgactacacattcattgaaggtggt
aaggagcattacttcactgggatgatgctgaagaagtcacgggtaacactgctggacagt
gagattgtcgcctatccaaccactcagatgttgaggaacctgcttgttgctcaggtgctg
ttcagaggtcagaagttttgtctgatgacgtctcactttgagagctgtaaggccaatgca
gaggagcggatgagacagctgcagctcgttatgaggaagatgagcgaggcgcctgatgat
gtcaccgtcctgtttggaggagacaccaacctgagagctgctgaggtggccgaagtgggc
cttcccagcagcgtgtgtgacgtgtgggagcagctgggaaggccgctgtgctgccgcttc
acatgggacaccaagtacaacaccaacaacaatattccagtcaaccgccacttccgcttt
gaccgcgtgtacctgcgccgggcttccaaggacggggtcccgcaggtggaccctgacagc
atgggcttggtcgggctggagaagctgaagtgtggctgcttcaccagtgatcactgggga
atctactgtagattctctgctgagtag
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