Lates calcarifer (barramundi perch): 108873131
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Entry
108873131 CDS
T04895
Name
(RefSeq) non-homologous end-joining factor 1 isoform X1
KO
K10980
non-homologous end-joining factor 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
108873131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108873131
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
108873131
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Motif
Pfam:
XLF
XLF_CC
XRCC4
Motif
Other DBs
NCBI-GeneID:
108873131
NCBI-ProteinID:
XP_018516772
UniProt:
A0AAJ7LAQ0
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Position
LG7_2:complement(1176854..1190463)
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AA seq
336 aa
AA seq
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MMEVSGAPAVVLLQRPWLPVSISGCQLLAKIWFGDSAYHILLTDMICVWEERMDSAAIQR
RAQKLFAVSSNQELNRRLRAPVKAFFSHLCEVVQPCLSGSGERADGEALISLTRQDDGNI
SMKLKSELAGLPFYWEFHCTPAPVTLVCLQLVRPLLAMSHLLQRQVEQLGGLLVRKDAEI
QDYRENGATLSRERLQTDVFEEETYREDFMAKALPLVCSEQQDALGFDADLQQLYASVVA
HGNAPARKRKLSEERPAEEDRPAAEEPDLTPSLGVGSVSSETAERDRKQSHNGQTDAARA
KMADRAAVQQSLSVTSDPAERPSSKPKKKKVVGLFR
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggtgagcggagcccccgccgtcgtcctcctccagcgtccctggctccctgtg
agcatcagcggctgccagctcctcgctaagatctggttcggagactcggcgtaccacatc
ctgctgacggacatgatctgtgtgtgggaggagaggatggactcggctgccatccagcgc
cgagcacagaagctgtttgccgtttcttccaaccaggagctgaacaggcgtttacgagcc
cctgtcaaagctttcttctcccacctgtgtgaggtggttcagccctgtctgtcaggaagc
ggcgagcgagcagacggcgaggctctgatctctctgacgcgacaggacgacggcaacatc
agcatgaagctgaagagcgagctggcggggctgcccttctactgggagtttcactgcacc
cccgcccccgtcacactggtgtgtcttcagctggtgcgccccctgctggcgatgagccac
ctgctgcagcggcaggtggagcagctgggaggtctgctggtgaggaaggacgcagagatc
caggactacagggagaacggggccacgctcagcagagagcggctgcagacggacgttttt
gaggaggaaacgtacagagaggacttcatggcaaaggctcttcctctggtttgctctgag
cagcaggacgctctgggcttcgacgccgacctgcagcagctgtacgcctccgtcgtcgct
cacggaaacgcacctgcgcgaaaacgcaaactgtccgaggagcgacccgcagaggaggac
cggcccgccgccgaggagcctgacctcaccccatctttaggtgttggatctgtcagcagt
gaaacagctgagagggacagaaaacagagccacaatggccagacagacgcagctagagcc
aagatggccgacagagccgcagtgcaacagtctctgtccgtcacgtccgaccctgcagag
cgaccgtcctccaaaccaaagaagaagaaagtcgttggattgttcagatga
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