KEGG   Lates calcarifer (barramundi perch): 108873135
Entry
108873135         CDS       T04895                                 
Name
(RefSeq) tubulin alpha chain
  KO
K07374  tubulin alpha
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04145  Phagosome
lcf04210  Apoptosis
lcf04530  Tight junction
lcf04540  Gap junction
lcf04814  Motor proteins
lcf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    108873135
  09143 Cell growth and death
   04210 Apoptosis
    108873135
  09144 Cellular community - eukaryotes
   04530 Tight junction
    108873135
   04540 Gap junction
    108873135
  09142 Cell motility
   04814 Motor proteins
    108873135
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108873135
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcf03019]
    108873135
   03036 Chromosome and associated proteins [BR:lcf03036]
    108873135
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lcf04812]
    108873135
   04147 Exosome [BR:lcf04147]
    108873135
Messenger RNA biogenesis [BR:lcf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108873135
Chromosome and associated proteins [BR:lcf03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     108873135
Cytoskeleton proteins [BR:lcf04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    108873135
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108873135
  Exosomal proteins of other body fluids (saliva and urine)
   108873135
  Exosomal proteins of colorectal cancer cells
   108873135
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 108873135
NCBI-ProteinID: XP_018516777
UniProt: A0A4W6DX13
LinkDB
Position
LG7_2:complement(1139537..1142503)
AA seq 449 aa
MRECISMHVGQAGTQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSVGEEDEGEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatttctatgcacgtcggccaggccggcacccagatgggcaatgcatgc
tgggagctgtattgcctggagcacggcatccagccggacggtcagatgcccagcgacaag
acgatcggaggaggagacgactccttcaacaccttcttcagtgagactggagctggaaaa
catgttcccagagctgtgtttgtggacctggagccgacagtcatcgatgaagttcgaact
ggaacctaccgacagctcttccaccctgagcagctgatcaccgggaaggaagacgccgcc
aacaactacgctcgtggtcactacacggtcggaaaggagatcatcgacctggttctggac
aggactcgtaagctggccgaccagtgcacagggctccaaggtttcctcatcttccactcc
tttggaggaggaaccggctctggcttcacctctctgctgatggagcgtctctccgtcgac
tacggcaaaaagtccaagctggagtttgcggtttacccggctcctcaggtgtccacggcc
gtggtggagccctacaactccatcctgaccacccacaccaccctggagcactcggactgc
gccttcatggtggacaacgaggccatctacgacatctgccgcaggaacctggacatcgag
cgtcccacctacaccaacctcaacaggctgattggacagatcgtctcctccatcaccgcc
tccctgcgcttcgacggcgccctgaacgtggacctgacggagttccagaccaacctggtg
ccctaccctcgcatccacttccctctggccacctacgcccctgtcatctctgcagagaag
gcctatcacgagcagctctctgtcgctgacatcaccaacgcctgcttcgagccggccaat
cagatggtgaagtgcgaccctcgtcacggcaagtacatggcctgctgcctcctgtaccgc
ggagacgtggtgcccaaagacgtcaactcggccatcgccaccatcaagacgaagcgcagc
atccagtttgtggactggtgtcccacaggcttcaaggtgggcatcaactaccagcctccc
accgtggttcctggaggagacctggccaaggtgcagagggccgtgtgcatgctgagcaac
accaccgccattgccgaggcctgggctcgactggaccacaagttcgacctgatgtacgcc
aagagggccttcgtccactggtacgtgggagaggggatggaggagggagagttctcggag
gccagagaggacatggccgccctggagaaggattacgaagaggtgggaaccgacagcgtc
ggggaggaggacgaaggagaggagtactag

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