Lates calcarifer (barramundi perch): 108873135
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Entry
108873135 CDS
T04895
Name
(RefSeq) tubulin alpha chain
KO
K07374
tubulin alpha
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04145
Phagosome
lcf04210
Apoptosis
lcf04530
Tight junction
lcf04540
Gap junction
lcf04814
Motor proteins
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108873135
09143 Cell growth and death
04210 Apoptosis
108873135
09144 Cellular community - eukaryotes
04530 Tight junction
108873135
04540 Gap junction
108873135
09142 Cell motility
04814 Motor proteins
108873135
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108873135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108873135
03036 Chromosome and associated proteins [BR:
lcf03036
]
108873135
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108873135
04147 Exosome [BR:
lcf04147
]
108873135
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108873135
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
108873135
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
108873135
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108873135
Exosomal proteins of other body fluids (saliva and urine)
108873135
Exosomal proteins of colorectal cancer cells
108873135
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
108873135
NCBI-ProteinID:
XP_018516777
UniProt:
A0A4W6DX13
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All DBs
Position
LG7_2:complement(1139537..1142503)
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AA seq
449 aa
AA seq
DB search
MRECISMHVGQAGTQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSVGEEDEGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatttctatgcacgtcggccaggccggcacccagatgggcaatgcatgc
tgggagctgtattgcctggagcacggcatccagccggacggtcagatgcccagcgacaag
acgatcggaggaggagacgactccttcaacaccttcttcagtgagactggagctggaaaa
catgttcccagagctgtgtttgtggacctggagccgacagtcatcgatgaagttcgaact
ggaacctaccgacagctcttccaccctgagcagctgatcaccgggaaggaagacgccgcc
aacaactacgctcgtggtcactacacggtcggaaaggagatcatcgacctggttctggac
aggactcgtaagctggccgaccagtgcacagggctccaaggtttcctcatcttccactcc
tttggaggaggaaccggctctggcttcacctctctgctgatggagcgtctctccgtcgac
tacggcaaaaagtccaagctggagtttgcggtttacccggctcctcaggtgtccacggcc
gtggtggagccctacaactccatcctgaccacccacaccaccctggagcactcggactgc
gccttcatggtggacaacgaggccatctacgacatctgccgcaggaacctggacatcgag
cgtcccacctacaccaacctcaacaggctgattggacagatcgtctcctccatcaccgcc
tccctgcgcttcgacggcgccctgaacgtggacctgacggagttccagaccaacctggtg
ccctaccctcgcatccacttccctctggccacctacgcccctgtcatctctgcagagaag
gcctatcacgagcagctctctgtcgctgacatcaccaacgcctgcttcgagccggccaat
cagatggtgaagtgcgaccctcgtcacggcaagtacatggcctgctgcctcctgtaccgc
ggagacgtggtgcccaaagacgtcaactcggccatcgccaccatcaagacgaagcgcagc
atccagtttgtggactggtgtcccacaggcttcaaggtgggcatcaactaccagcctccc
accgtggttcctggaggagacctggccaaggtgcagagggccgtgtgcatgctgagcaac
accaccgccattgccgaggcctgggctcgactggaccacaagttcgacctgatgtacgcc
aagagggccttcgtccactggtacgtgggagaggggatggaggagggagagttctcggag
gccagagaggacatggccgccctggagaaggattacgaagaggtgggaaccgacagcgtc
ggggaggaggacgaaggagaggagtactag
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