Lates calcarifer (barramundi perch): 108873154
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Entry
108873154 CDS
T04895
Symbol
ahr2
Name
(RefSeq) aryl hydrocarbon receptor
KO
K09093
aryl hydrocarbon receptor
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108873154 (ahr2)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108873154 (ahr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
bHLH_NPAS4
PAS_9
bHLH_HIF1A
PAS_4
NRIP1_repr_3
Motif
Other DBs
NCBI-GeneID:
108873154
NCBI-ProteinID:
XP_018516801
UniProt:
A0A4W6DXM9
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All DBs
Position
LG7_2:1474279..1537387
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AA seq
1033 aa
AA seq
DB search
MLPSTALYAAKKRKKPVQKIPKPPPPDGAKSNPSKRHRDRLNSELDKLTSLLPFTEEVRA
RLDKLSVLRLSVGYLKVKSFFKATMKKSQNGSSWTSERSLMFGGSVPNALTPPSSTSTSS
PSMTFTSQVTSIDGVGFSEGDLLLQALNGFVLVVTAEGYIFYTSPTIQDFLGFHQSDVVH
QSVFELIHTDDRALFRRQLHFALNPTTSNQDGTAQSTSEQSSADISSSVMTYEPEAVPPE
NSSFLERNFCCRFRCLLDNSSGFLALNFRGRLKFLHGQNRVSEDGTLVPPQLALFAIATP
LQPPSILEIRTKTLIFQTKHKLDFTPMGIDTRGKVVLGYNETELCTKGSGYHFIHAADMM
YCADNHIRMIKTGDSGLTVFRLLAKTGTWVWVQANARLVFKGGKPDFIVARQRALTNEEG
EEQLRLRRLQLPFSFTTGEAVLYDVTPSVDMPDPCSAPKQRKMDDFSVSPNSLLGCILRQ
DQSVYCEHNSANNLNSLNDVAFKDTHATVNVPGDIWQHPSPKAVVGSLVKSEATVQDMME
TLQQILGDDTLTDALDVGPDELKSWESTLLRMSINSCEVSEDLNEILSDDILSYVEEQLQ
REGGLKLPDQLNDVPACLSTLDLQNQGPDQAGELTFSWPLEPQNLLIPNRVQMMPGQPTP
VLETMKLTHMDLPQLSSSGLNGPTLQQIASQQSLPNSVGLGNVGAPVTFNPTLSESCAQT
QNQLRSLQVNSKENNNLEAFSQLHPSQMQNHMQMRAPNLPIGLQDQSQERKLNPVFHFQG
NQWSPPVPNSNQTDSFVQTYTQNISNKSGFTADSPSSSCLQGRFALQTQKSENQRQSWPL
EQQQPQLISSGPQQMGACLNQMSGFQRNPLPGAVAPQTTVNGRPMFRTPETSNVLFPAQQ
DLELPPLAPPNSCMFRNATQSVPVNGVHLSQAPSCQQLDPADSNHMPSKPSCLYQGLPGG
ASVPGMTAIPNPDDAALSCQMTAALDSNGLLAQQQQYLNFNEQTQINSRPVVGNGDFPFP
SLPDGIVYYSENK
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgctgccgagcacggcgctttacgcggcgaagaaacggaagaagccggtccagaaaatc
cccaaacctccacctcccgatggcgccaagtccaacccgtccaaacgccaccgcgacagg
ctcaacagcgagctggacaagctcaccagcctgctgcccttcaccgaggaggtcagggct
cggctcgacaagctgtctgtcctccgcctcagcgtcggctacctgaaggtcaagagcttc
ttcaaagccaccatgaagaaaagccagaatggctccagctggacgagcgagcggagcctg
atgttcggggggagcgtcccgaacgcgctgacgcctccgtcctccacctccacctcctct
ccctccatgaccttcacctcccaggtgacctccatcgacggagtaggcttctctgaggga
gacctgctgctccaggcgctgaatggcttcgtgttggtggtgacggctgaaggttacatc
ttctacacgtccccgaccatccaggacttcctcggcttccaccagtcggacgtcgtccat
cagagtgtgttcgagctgatccacacagacgaccgagctctcttcagacgacagcttcac
tttgccctcaacccgaccaccagcaaccaggacggcaccgcacagagcaccagtgagcag
agctctgcagatatcagcagcagtgtgatgacctacgagcccgaggccgtccctccagaa
aactcgtctttcctggagagaaacttctgctgtcggtttcgctgcctgcttgacaactcg
tctggcttcctggccctgaacttccgcggccgcctcaagttcctccacggtcagaaccgg
gtgtctgaggacgggacgctggtgccccctcagctcgccctgttcgccatcgccacacca
ctgcagccgccatccatcctggagatccgcaccaagacgctcatcttccagaccaaacac
aagctggacttcacgcccatgggcatcgacaccagagggaaggtggttctcggttacaat
gaaactgagctctgtacgaagggttcaggataccacttcatccacgctgccgacatgatg
tactgcgccgacaaccacataagaatgataaaaaccggagacagcggtttgaccgtcttc
aggctgctggccaaaaccgggacgtgggtctgggtgcaggccaacgccaggctggtgttt
aaaggagggaaaccagatttcatcgtggcgcggcagagagctttgacaaatgaagaagga
gaagaacagctacgcctcagacgcctgcagctgccgttcagcttcaccactggagaggcg
gtgctgtacgacgtcaccccgtctgttgatatgcccgacccgtgctccgccccgaagcag
aggaagatggacgacttctccgtcagccccaactccctcctgggctgcatactgcgtcag
gaccagtctgtctactgtgaacacaacagcgccaacaacttaaactccctcaacgacgtc
gcgttcaaggacacccacgccactgtcaatgttcccggggacatctggcagcacccttcg
cccaaagctgtcgtgggaagtctggtgaagtcggaggccacagtccaggacatgatggag
accctgcagcagatcctcggggacgacaccctcactgacgccctggatgtgggaccggac
gagctgaagagctgggagagtacgctgctgaggatgagcatcaacagctgcgaggtgagc
gaagacctgaacgaaattctcagcgatgatatcctgtcttatgtggaggagcagctccag
agagagggtggcctcaagctgccagatcagctgaatgacgtaccggcctgcctctccact
ctggacctccagaaccagggtcctgaccaagctggggagctgaccttcagctggcctctg
gagcctcagaacctgctgataccaaacagagtgcaaatgatgcccggacaaccgactcca
gtcctggagacaatgaaactgacccacatggatcttcctcagttgagttcttctggtctt
aacggtccaacccttcagcagatcgcctcccagcaatcgctccccaattctgtcggtctt
ggcaacgttggcgctccagtgacctttaaccccaccctgtcggagtcctgtgctcaaaca
cagaatcagctgaggagcttacaagtcaacagcaaggaaaacaacaacctcgaagccttc
agtcagcttcaccccagtcaaatgcagaaccacatgcagatgagggcgcccaacctcccg
atcggcctccaggaccaaagccaggaaaggaagttaaaccctgttttccactttcagggc
aaccagtggagcccccctgtccccaactcaaaccaaacggacagctttgtacagacatac
acccaaaatatttcaaacaaatcaggttttactgcagattccccctcctccagctgcttg
cagggccgctttgcacttcagacacaaaaaagtgagaatcagagacagtcttggccactg
gagcaacagcaaccgcagctgatttcaagtgggccccaacaaatgggcgcctgcctcaac
caaatgtcaggatttcaaaggaatcctcttcctggagccgtcgcgccccaaaccactgtc
aatggcaggccaatgttcaggactccagagacttccaatgtactatttcctgctcagcag
gacttggagctgccacctctggcgcctcctaacagctgtatgttcagaaacgccacccag
tctgtgcctgtaaacggagtgcacctcagtcaggcgccctcctgccagcaattggaccca
gccgacagcaaccacatgccctccaagccctcctgcctctatcagggtcttcccggagga
gcatctgtgccggggatgacggcgataccaaatcccgatgatgcagcgctgtcctgccaa
atgactgctgctctcgactcgaacggcctgttggcgcaacaacagcagtatcttaacttc
aatgaacagacgcagattaacagccgtccagtcgtcgggaacggagatttccccttcccc
tcgctgcccgatgggattgtatactactcagagaacaaatag
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integrated database retrieval system
