Lates calcarifer (barramundi perch): 108873198
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Entry
108873198 CDS
T04895
Name
(RefSeq) homeobox protein GBX-2
KO
K09321
homeobox protein GBX
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108873198
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
108873198
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7645
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
108873198
NCBI-ProteinID:
XP_018516836
UniProt:
A0A4W6C4L2
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Position
LG7_2:643252..646883
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AA seq
356 aa
AA seq
DB search
MSAAFSPSFMVMQRPLGSTTAFSIDSLIGGPPQPSPGHFVYTGYPMFMPYRSVVLQPPPP
PPPALQQALPAGHHPHPQIPGLQSGFCSSLAQGLTQGMALTSTLMASLPGGFSPSQQHQD
AARKFGSAQALHAVFDKAQELRLEAEDGKGFLPGKDAALQGFHDADTAVQTATVRTLSKE
DSKEDECGRKDESFSMDSDLDYSSDDNLTSMCHKEDGDGGGAGLDDGAHLHGSGGGGGGS
GGGGGAGSGGGGGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVK
IWFQNRRAKWKRVKAGNVNNKSGEPSRNPKIVVPIPVHVSRFAIRSQHQQMEQARP
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcagcgttcagtccgtccttcatggtgatgcagcggccactcggaagcaccacc
gccttcagcatcgactctctgatcggggggcccccgcagcccagcccgggacacttcgtg
tacactggctacccgatgttcatgccgtaccggtcggtggtgctccagccgccgcccccg
ccccccccggccctgcagcaggctctccctgccggacaccacccgcacccgcagatcccc
ggcctgcagagcggcttctgctccagcctggcgcagggcctgacgcagggcatggcgctc
acctccacgctcatggcgtcgctgcccggcggcttctccccgtcccagcagcaccaggac
gcggcccggaagttcggctccgcacaggcgctgcacgcggtcttcgacaaggctcaggag
ctgcggctggaggcggaggacgggaagggtttcctgccggggaaggacgcggcgctgcag
ggtttccacgacgcggacacggcggtgcagacggccacagtcagaacactcagtaaagaa
gactccaaggaggacgagtgcggccggaaggacgagagtttctccatggacagcgacctg
gactacagctctgatgacaacctcacctccatgtgtcataaggaggacggcgacggcggc
ggcgcgggtctggacgacggcgcgcacctgcacggctccggaggcggcggcggaggctcc
ggaggcggcggcggcgcggggagcggcggcggaggcggcaagaaccggcggcggcggacg
gcgttcaccagcgagcagctgctggagctggagaaagagttccactgcaaaaagtacctg
tcgctgaccgagcgctcccagatcgcgcatgcgctgaagctgagcgaggtgcaggtgaag
atctggttccagaaccggcgcgccaagtggaaacgggtcaaagccgggaacgtcaacaac
aagtccggggagccgtcccggaaccccaaaatagtggtcccgatcccggtgcacgtgagc
cgcttcgcaataaggagtcagcaccagcagatggagcaggccagaccgtag
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