Lates calcarifer (barramundi perch): 108873199
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Entry
108873199 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox protein OTX1 B
KO
K09326
homeobox protein OTX1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108873199
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108873199
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
108873199
NCBI-ProteinID:
XP_018516841
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All DBs
Position
LG16_LG22:complement(16453859..16462019)
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AA seq
332 aa
AA seq
DB search
MMSYLKQPPYGVNGLGLSGAAMDLLHPSVGYPATPRKQRRERTTFTRSQLDVLEALFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSGSSAKARPPKKKSSPARESTG
SESSGQFTPPAVSSTGSSSSSSSSTNHTGPTALSSTSTSISTVSSIWSPAISPGNAPAPA
VAPLPEPGPPSNASCMQRSMSGSAAAATSYPMSYNQTPGYGQGYPAPSSSYFSGVDCGSY
LAPMHSHHHPHQLSPMTASSMSGHPHHHISQSSGHHHHHHHHQAYGGSGLAFNSSDCLDY
KEQTAASSWKLNFNTTDCLDYKDQASWRFQVL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctacctcaaacagcccccctacggcgtcaacggcctggggctcagcggcgct
gccatggacctgctgcacccctcagtgggctacccggcgactccaaggaagcagcggcgg
gagcggaccacctttacccgctcccagctcgacgtcctggaggctctgttcgccaaaacc
cgctacccggatatcttcatgcgggaggaggtcgcactgaaaatcaacctgcccgagtcc
agagtccaggtgtggttcaagaaccggagggccaagtgtcgccagcagcagcagagcggc
agcagtgccaaagccaggccgcccaagaagaagtcttctccagcccgggagagcactgga
tccgagagcagcggccagttcacacctcctgccgtctccagcaccggctcatcctcctct
tcctcctcctccaccaatcacacaggcccaacagcgctcagcagcacctctacctccatc
agcacagtctcctccatctggagcccagctatctccccgggaaacgctcctgctcctgct
gtggccccactccccgagcccggacccccatccaacgcgtcctgtatgcagcgttcaatg
tcaggctctgctgccgccgccacttcctaccccatgtcctacaaccagacgccgggctac
ggccagggctaccctgccccctccagctcttacttcagcggcgtggactgcggatcctac
ctggcccccatgcactcccaccaccatccccaccagctcagccccatgacagcctcctcc
atgtcaggccacccgcaccaccacatcagccagtcatcaggccaccaccaccatcaccac
catcaccaggcctacggcggctctggcctggccttcaactcctccgactgcctggattac
aaagagcagactgcagcctcctcgtggaagctcaactttaacaccacagactgcttggac
tacaaagaccaggcctcctggaggttccaagtcttgtga
DBGET
integrated database retrieval system
