Lates calcarifer (barramundi perch): 108873208
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Entry
108873208 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: inhibin beta B chain-like
KO
K22687
inhibin beta B chain
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04060
Cytokine-cytokine receptor interaction
lcf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108873208
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108873208
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108873208
Cytokines and neuropeptides [BR:
lcf04052
]
Cytokines
Transforming growth factors (RSTK binding)
108873208
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
108873208
NCBI-ProteinID:
XP_018516848
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Position
LG7_2:784573..795240
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AA seq
390 aa
AA seq
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MSSCLFRLALLVACVLSIRCTAAPGTEAEAHTAPRDTCASCGIAQPEDPESGRLNVDFLE
AVKRHILSRLQMRERPNITHPVPKAAMVTALRKLHAGKLREDGRVEIPNLDGHPMSNEVL
EESSEIISFAEKDDMVTSKSSLFFLISSEGNQNLYVTQATLWLYFKLLPSPVEVRSRRKV
TVKVYYQEPGLSSKWNLVEKRVELKRSGWHTFMLTDAVRLVFEKGDRRQNLDVRCEGCEA
EGVMPILLNHNDESHRPFLVVQARQADNTHRIRKRGLECDGSSNLCCRQQFYIDFRLIGW
NDWIIAPSGYFGNYCEGNCPAYMAGVPGSASSFHTAVVNQYRMRGMSPGSMNSCCIPTKL
STMSMLYFDDEYNIVKRDVPNMIVEECGCA
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgagtagctgtctcttccgactggcactcctcgtggcttgcgtcctctccatccgctgc
accgctgcgcccgggaccgaggcggaggcgcacacggcgccccgggatacctgcgcgtcc
tgcggcatcgctcagccggaggaccccgagtcgggccggctgaacgtggacttcctagag
gcggtaaagaggcacatcctcagccggctgcagatgcgggagaggcccaacatcacgcac
ccggtcccgaaggcggccatggtgacggcgctgcggaagctccacgccgggaagctgcgg
gaggacgggagggtggagatccccaacctggacgggcacccgatgagcaacgaggtgctg
gaggagagctcggagatcatcagctttgcagagaaagatgacatggtgacatccaagtcc
agcctcttcttcctgatctccagcgagggcaaccagaacctgtatgtgacgcaggccacc
ctctggctctacttcaagctgctgccgtctccggtggaggtgcgttcacggcggaaggtg
acggtgaaggtgtactaccaggagcccggcctcagcagcaagtggaacctggtggagaag
cgggtggagctgaagcgcagtggctggcacaccttcatgctgactgacgccgtccggctg
gtgtttgagaagggcgaccggcggcagaacctggacgtgcgctgtgaaggctgcgaggcg
gagggtgtcatgcccatcctgctcaaccacaatgacgagtcccaccggcccttcctggtg
gtgcaggcacggcaggccgacaacacgcaccgcatccgcaagagggggctggagtgcgac
ggcagcagcaacttgtgctgccgccagcagttctacatagacttccggctgatcggctgg
aacgactggatcattgcgccgtcaggctactttgggaactactgcgaggggaactgtccg
gcctacatggcgggcgtccccggttcggcctcgtccttccacacagcggtggtgaaccag
taccgcatgcgggggatgagtccgggctccatgaactcctgctgcattcccaccaagctc
agcaccatgtccatgctctactttgacgacgagtacaacattgtcaagcgggacgttccc
aacatgattgtggaggagtgtggctgtgcttga
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