Lates calcarifer (barramundi perch): 108873243
Help
Entry
108873243 CDS
T04895
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X1
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00603
Glycosphingolipid biosynthesis - globo and isoglobo series
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
108873243
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108873243
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
108873243
Glycosyltransferases [BR:
lcf01003
]
Glycan extension
FORS blood group (Forssman antigen)
108873243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_6
Motif
Other DBs
NCBI-GeneID:
108873243
NCBI-ProteinID:
XP_018516919
UniProt:
A0AAJ7LB09
LinkDB
All DBs
Position
Unknown
AA seq
365 aa
AA seq
DB search
MNLFNGKILAVTLMTLLTLGIFYSYILRHYRFVVAFKHKDKTSADSSAASDSTTAANCVK
ESPAINIRSHEFSLVVPDHLKYNQPHLTENSRTDVMTVTPWLAPVVWEGTFNQDVLDSIY
KPKNISIAATVFAVGKYTMFLKNFLESAEQHFFVGFRVHMHVFTDQPNEVPKVKMAAGRQ
VMVHKVPSLNRWQEISARRMKQIQDLIEEKLRGNTDYIFCLDVDSKFHGRWGTESLGRLV
TVVHPGYYRDDRSRFPYERRPQSRAYVAPGEGDFYYCGGAYGGLLQEVHQLTKTCNLNFE
ADAKDGIEAAWQEESHLNRYMWINKPSKVLSPEYLWQDFKPKNPEIRLLRFSGVIKNYAD
IRPNV
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaatttattcaacggaaaaattctggcagtgactctgatgacgctgctgacactgggg
attttctactcctacatcttgaggcactacagatttgttgttgccttcaagcataaagac
aagacgtcagcagacagttcagcagcgtctgactccaccacagcagcaaactgtgtgaaa
gaatctccggccatcaacatccgaagtcatgagttcagcctggtggttcccgatcatctg
aagtacaaccagccccatctcacagagaatagtcgtaccgacgtgatgacggtgactccc
tggttggctcctgtggtctgggagggaacctttaaccaagatgtccttgacagcatctac
aaaccaaagaacatcagcatcgcagccactgtgttcgctgttggaaagtacaccatgttc
ctgaaaaacttcctggaatcggcagagcagcacttctttgttggtttcagggttcacatg
cacgtcttcaccgaccagccgaacgaggtgcccaaagtcaaaatggctgccggtaggcag
gtcatggtgcataaagttcccagcttaaatcgttggcaggagatctctgctcgccggatg
aagcagatccaggacctgatagaggagaagcttcgtggaaacaccgactacatcttctgt
ctggacgtggactccaagttccacggtcgctggggaactgagtcactgggccgactggtc
actgtggtacatccaggttactacagagacgaccgcagcaggttcccctacgagcggagg
cctcaatccagagcctatgtggctcctggggagggagacttctactactgtggaggggcg
tatggaggcctcctgcaggaggtccaccagctcaccaaaacctgcaatttaaactttgag
gctgacgcgaaggacggcattgaggctgcttggcaggaggagagtcacctgaacaggtac
atgtggatcaacaagcccagtaaggttctatcccctgagtacctgtggcaggacttcaag
cccaaaaaccctgagattcgcctcctcaggttctctggagtcatcaagaactacgctgat
atccgacccaacgtctga
DBGET
integrated database retrieval system
