Lates calcarifer (barramundi perch): 108873292
Help
Entry
108873292 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: actin-related protein 2-A
KO
K17260
actin-related protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
lcf04530
Tight junction
lcf04810
Regulation of actin cytoskeleton
lcf05100
Bacterial invasion of epithelial cells
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108873292
09144 Cellular community - eukaryotes
04530 Tight junction
108873292
09142 Cell motility
04810 Regulation of actin cytoskeleton
108873292
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108873292
05100 Bacterial invasion of epithelial cells
108873292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108873292
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108873292
04147 Exosome [BR:
lcf04147
]
108873292
Membrane trafficking [BR:
lcf04131
]
Others
Actin-binding proteins
Arp2/3 complex
108873292
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
108873292
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108873292
Exosomal proteins of other body fluids (saliva and urine)
108873292
Exosomal proteins of bladder cancer cells
108873292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
108873292
NCBI-ProteinID:
XP_018516990
UniProt:
A0AAJ7LAV4
LinkDB
All DBs
Position
LG16_LG22:complement(16188445..16199621)
Genome browser
AA seq
339 aa
AA seq
DB search
MVGDEASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDSRNCKILLTEPPMN
PTKNREKIIEVMFETYQFGGVYIAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSL
PHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMMKEKLCYVGYNIEQEQKLAL
ETTVLVESYTLPDGRVIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRP
EFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVDKLSKFKIRIEDPPRRKHMVF
LGGAVLADIMKDKDNFWLTREEYQEKGVRVLEKLGVTVR
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggtgggggacgaggccagcgagctgcgctccatgctggaggtcaactacccgatggag
aatggtatcgtcaggaactgggatgacatgaagcacctgtgggactacacctttggcccg
gagaagctcaacattgactcccgcaactgcaagatccttctgaccgagccccccatgaac
cccaccaagaaccgtgagaaaatcatcgaggtgatgtttgagacctaccagtttggagga
gtctacattgctattcaagctgtgctgacgctgtatgctcaaggccttctgactggtgtg
gtggtggactctggtgacggtgtgacacacatctgtcccgtgtatgagggcttcagcctg
ccccacctgacgaggcgcctggacatcgcaggcagggacatcacccgctacctcatcaag
ttgttgttgttgaggggttatgccttcaaccactctgcagactttgagacggtgcgcatg
atgaaggagaagttgtgctacgtgggctacaacatcgagcaggagcagaagctggcgctg
gagaccaccgtgctggtggaatcatacacgctgccagatggtcgtgtgatcaaggtggga
ggagagcggtttgaggcccctgaggctctgttccagccccacctcatcaacgtggagggt
gtcggagtggccgagctccttttcaacaccatccaggcggccgacatagacaccaggccc
gagttctacaaacacattgtgttatcaggaggatccaccatgtacccaggcctgccatct
cggctggagagggaactcaagcagctgtacctggagcgtgtgctcaagggagatgtggac
aagctttcgaaatttaagatccggattgaggatcctcccaggcgaaagcacatggtgttc
ctgggcggagccgtgctggccgacatcatgaaggacaaggacaacttctggctgacccgg
gaggagtaccaggagaaaggagtccgtgtgctggaaaaactcggagtcaccgtcagataa
DBGET
integrated database retrieval system
