Lates calcarifer (barramundi perch): 108873359
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Entry
108873359 CDS
T04895
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108873359
Membrane trafficking [BR:
lcf04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
108873359
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
108873359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Peptidase_S66
Motif
Other DBs
NCBI-GeneID:
108873359
NCBI-ProteinID:
XP_018517031
UniProt:
A0A4W6DIP0
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Position
LG19:24408704..24435344
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AA seq
632 aa
AA seq
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MAASVREKQAVALKRMLNFNAPPLKNTTAEPVWKVLIYDRFGQDIISPLLSVKELRDMGI
TLHLLLHSDRDPIPDVPAVYFVMPTEENIDRICQDLRNQLYESYYLNFISAISRSKLEDI
ASAALAANAVSQVTKVFDQYLNFITLEDDMFILCHQNKELISYHAINRADIQDTDMEAIM
DTIVDSLFCFFVTLGAVPIIRCPRGNAAEMVAVKLDKKLRENLRDARNSLFTGDNMAAGQ
FSFQRPLFVLADRNVDMATPLHHTWTYQALIHDVLDFHLNRVMMEEGAGAEPSPAGARPK
KKSRKSYDLTAADKFWQKHKGSPFPEVAESVQEELDTYRAQEDEVKRLKSIMGLEGEDEG
AISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLDHIKSRKLDVYFEYEEKLMS
KSTLDKSLLDIISDPDAGTPEDKMRLFLIYYITAQQAPSESDLEQYKKALLDAGCDLSPL
NYIKQWKAFTKMAATPANYGNSGVKPMGLFSRVMNTGSQFVMEGVKNLVLKQHNLPVTRI
LDNLMEMKSHPETDDYRYFDPKMLRGSESSIPRNKNPFQEAIVFVVGGGNYIEYQNLVDY
TKSKQGKKVVYGCSELFNAAQFIKQLSQLGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtctgtccgggagaagcaggcagtcgctctgaagcgaatgctgaacttcaac
gctcctcctctgaagaacacaacagctgagccagtatggaaggtgctgatatacgaccgg
tttggccaggacatcatctccccgctgctgtccgtcaaagagctgagagacatgggcatc
accctgcaccttctgcttcactcagacagagatcccatccctgatgtaccagccgtctac
ttcgtcatgcccacagaggagaacatcgacaggatatgtcaggacctgaggaaccagctg
tatgagtcgtactacctgaacttcatctctgccatcagtagaagtaaactggaggacatc
gccagcgccgctctggctgccaacgccgtcagccaagtcaccaaggtgtttgatcagtac
ctgaacttcatcactctggaggacgacatgttcatcctctgtcaccaaaacaaggagctc
atctcctaccacgccattaacagagcagacatccaggacacagacatggaggccatcatg
gacaccatcgtggacagtctcttctgtttcttcgtcactctgggtgcggtgccgatcatc
cgctgtccccgaggaaacgcagcagagatggtggctgtgaagttggataagaagctccgt
gagaacctgcgggacgccagaaacagcctcttcaccggagacaacatggccgccggacag
ttcagctttcagaggcctctgttcgttctggcggatcgtaatgtggacatggccacgccc
ctccaccacacctggacctatcaggcgctgatccacgacgtcctggacttccatctgaac
agagtgatgatggaggagggcgctggggcggagccatcgcccgccggcgccagaccaaag
aagaagagcaggaagtcctacgacctgaccgctgccgacaagttctggcagaaacacaag
ggcagtccgttccctgaggtggcggagtcggttcaggaggagctggacacttacagagct
caggaggacgaggtcaaacggctgaagagcatcatgggtttagagggagaggatgaagga
gccatcagcatgctgtcagacaacacagccaagctcacctctgccgtcagctctctgccg
gagctgctggagaagaagaggctcatcgacctgcacaccaacgtcgccacggccgtactc
gaccacatcaagagtcgtaaattggacgtttactttgagtatgaggagaaactgatgagc
aagtcgactttagacaaatcactgctggacatcatcagtgacccagatgccgggacccca
gaagacaaaatgagactgttcctcatctactacatcaccgctcagcaggctccttcagag
tctgacctggagcagtataagaaggctttactggacgcaggctgtgacctttcacctcta
aactacatcaaacagtggaaggcgttcaccaagatggctgccaccccggccaactatggc
aacagtggagtcaaacccatggggctgttttccagagtgatgaataccggctcccagttt
gtcatggagggagtgaagaacctggtgctcaaacagcataatctcccagtcactcggatc
ctcgacaacctgatggagatgaagtcccatcctgaaacagatgactatcgatactttgac
ccgaagatgctgcgaggcagcgagagctccattcccaggaacaagaacccgtttcaggag
gccattgtgtttgtggtgggaggaggaaactacatcgagtatcagaacctggtggattac
acaaagtctaaacaggggaagaaggttgtttacggctgcagtgaactcttcaacgctgcg
cagttcatcaaacagctctcccagctcggccaaaagtga
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