Lates calcarifer (barramundi perch): 108873432
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Entry
108873432 CDS
T04895
Name
(RefSeq) 26S proteasome regulatory subunit 8
KO
K03066
26S proteasome regulatory subunit T6
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
108873432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lcf03051
]
108873432
Proteasome [BR:
lcf03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
108873432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_5
AAA_16
AAA_22
AAA_lid_PRS2_C
PRS7_OB
nSTAND3
RuvB_N
TIP49
AAA_3
AAA_28
AAA_18
Mg_chelatase
NPHP3_N
AAA_33
AAA_14
Parvo_NS1
ATPase
AAA_17
IstB_IS21
PhoH
AAA_24
AAA_7
FapA
DUF815
AAA_25
Sigma54_activat
bpMoxR
DUF5906
ABC_tran
AAA_11
RNA_helicase
Zeta_toxin
AAA_19
DivIC
TsaE
APG6_N
HR1
Motif
Other DBs
NCBI-GeneID:
108873432
NCBI-ProteinID:
XP_018517114
UniProt:
A0A4W6E7A5
LinkDB
All DBs
Position
LG23:9196469..9201099
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AA seq
406 aa
AA seq
DB search
MEVDGIDHMEMGESKGGSGLRQYYLSKIEELQLTVNEKSQNLRRLQAQRNELNAKVRLLR
EELQLLQEQGSYVGEVVRVMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDS
YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGI
AQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMARE
HAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDI
LDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVK
GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgacgggattgatcatatggaaatgggtgagagtaaaggtggctcaggtctc
cggcagtattatttgtctaagatagaagagttacagttgacagtgaatgaaaagagccag
aatctcagacgtctgcaggcacagaggaatgagctcaatgccaaagtgcgtcttcttcgt
gaggagctgcagttattgcaggagcagggatcctatgtaggtgaagtggtcagggtcatg
gacaaaaagaaagtgctggttaaggtacatccagaaggaaaatttgttgtagacgtggac
aagaacattgatatcaatgatgtgactccaaactgccgtgtggctctgcgtaacgacagc
tacaccctgcacaagatcctgcccaacaaggtggaccctctggtgtccctcatgatggtt
gagaaggtaccagactccacctatgaaatgattggtggcctggataagcagatcaaggag
atcaaggaagttattgagctgcctgtcaagcacccagagctctttgaggctttgggcatt
gcacagcccaagggtgtgctgttgtatggtcccccaggcacaggcaagaccctgctggcc
agagccgtggcccaccacactgactgtaccttcatcagggtctctggctctgagctggtc
cagaaattcatcggagagggtgcccgtatggtgcgcgagctcttcgtcatggccagagag
cacgctccttccatcatcttcatggatgagatcgactccatcggctcgtctcgtctggag
ggcggctcaggtggcgacagtgaggtgcagaggacaatgttagagctgctcaatcagctg
gacggcttcgaggcaactaagaacatcaaggtcattatggccaccaaccgtattgacatc
ctggactccgctctgctcagaccagggaggattgacaggaagattgagttccctcctcca
aatgaagaggcccgtctggacatcctgaagatccactccaggaagatgaacctgacacgt
ggcattaacctgaggaagatcgcagagctgatgcctggagcctctggtgctgaggttaag
ggtgtttgcacagaggcgggtatgtacgctctgagagagaggagagttcacgtcacccag
gaggactttgagatggctgtggctaaggtgatgcagaaagacagtgagaagaacatgtcg
atcaagaagctgtggaagtaa
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