Lates calcarifer (barramundi perch): 108873450
Help
Entry
108873450 CDS
T04895
Name
(RefSeq) nucleolar transcription factor 1-B isoform X1
KO
K09273
upstream-binding transcription factor
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108873450
03021 Transcription machinery [BR:
lcf03021
]
108873450
Transcription factors [BR:
lcf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
108873450
Transcription machinery [BR:
lcf03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
108873450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF4473
DHC
Motif
Other DBs
NCBI-GeneID:
108873450
NCBI-ProteinID:
XP_018517136
UniProt:
A0A4W6DZH3
LinkDB
All DBs
Position
LG23:9133628..9170974
Genome browser
AA seq
455 aa
AA seq
DB search
MSETEEPEWTKENFQKLFAAMKSNIPKRYRMFAYSKAQKALDWKKVAFPPFSPEECQEKW
GEILQKMRKFRSLTELIVEAEDALSEPKQNNKIHPKFPKRPTPPNALFYKENRAKFQEQH
PELSHREVLEVLGKKYPALPDEEKTPYKERHQLAVKEYKAKVQEFRKQFSSPPDRKRRKS
RKRKQVSADTPDGEQHTEGAEDLPPKPPLNGYNLFCKEQIASMAGISVKDYVIVWAQRWR
DLTMREKNKYNTRCKELKRQYAIKLNEYLQSYTEEEQQRILNENGIKIPKQCKGIQSEIK
PVFTHPGEPKMPSRSGNVIFYKAQMELLKEEFPNSKERFLKVCQSWQGLSIREKERYREK
AHERIRKYSVELQKWFKTLTAAEQEDYRACNPSKRQYLDDKKIIVCNIGEPYLSIPSDSE
DDDIEDSSSDEEEVTLNYYEDEEEEEEDDITFEMF
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaccgaggaacctgagtggaccaaggaaaatttccagaagctttttgctgca
atgaaaagcaacatccccaaacgttatagaatgttcgcttattccaaagcacagaaagct
cttgactggaagaaggtggctttccctcctttctctcctgaagagtgccaagaaaagtgg
ggagagattttgcagaagatgcgcaagtttcggtccctcactgaactcattgttgaagct
gaagatgccctttcagaacctaagcagaacaataaaatccatccaaagttcccgaagaga
cccacccctccaaatgccttgttttacaaggagaacagggccaagtttcaagagcagcac
ccagagctgagccacagagaggttttggaggtcttaggcaagaagtatcctgcgctccca
gatgaagagaagactccgtataaggagagacaccagcttgcagtaaaagaatacaaggca
aaggtgcaggaattcaggaaacaattttccagcccccctgatcgtaagcgcaggaaatct
cgaaagaggaagcaggtgtctgcagacaccccagatggtgaacagcatactgaaggtgca
gaagatctgcctcccaagcctcctctcaacggctataatctgttctgcaaagagcaaatt
gcatccatggcaggtatctcagtgaaagactatgtgatcgtgtgggcccaacgttggcga
gatctgactatgagagagaaaaacaagtacaatacacgctgcaaagagttgaagagacag
tatgcgatcaagctgaatgaatatctacagtcttacactgaggaggagcagcagcggatc
ttaaatgagaatggaatcaaaatacctaaacagtgtaagggaattcaaagtgaaattaaa
ccagtatttacacatcctggtgagcccaagatgccgtctcgatctggtaatgtaattttc
tacaaagctcagatggaacttcttaaggaggaattcccaaactcaaaggagcgcttcctc
aaggtctgccaaagttggcagggcctctctatacgagagaaggaacgctacagagagaaa
gcacatgaaaggataagaaaatactcagtagagctgcagaaatggtttaagacgctgaca
gcagcagagcaggaggactatagagcatgtaaccccagtaaacgtcagtacctcgatgac
aaaaaaattatagtttgtaacataggagaaccatacctgagcataccatcagattcagaa
gatgatgacattgaggacagcagcagtgatgaagaagaggttactctgaactattatgag
gatgaggaggaagaagaggaggatgacatcacctttgagatgttttag
DBGET
integrated database retrieval system
