Lates calcarifer (barramundi perch): 108873465
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Entry
108873465 CDS
T04895
Name
(RefSeq) heat shock protein HSP 90-beta isoform X1
KO
K04079
molecular chaperone HtpG
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04141
Protein processing in endoplasmic reticulum
lcf04217
Necroptosis
lcf04621
NOD-like receptor signaling pathway
lcf04914
Progesterone-mediated oocyte maturation
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108873465
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
108873465
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108873465
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
108873465
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108873465
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108873465
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lcf03110
]
108873465
04131 Membrane trafficking [BR:
lcf04131
]
108873465
03051 Proteasome [BR:
lcf03051
]
108873465
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108873465
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108873465
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
108873465
Chaperones and folding catalysts [BR:
lcf03110
]
Heat shock proteins
HSP90
108873465
Membrane trafficking [BR:
lcf04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
108873465
Proteasome [BR:
lcf03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
108873465
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
108873465
Exosome [BR:
lcf04147
]
Exosomal proteins
Proteins found in most exosomes
108873465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP90
HATPase_c_3
HATPase_c
LOH1CR12
MIT_ATG1
Motif
Other DBs
NCBI-GeneID:
108873465
NCBI-ProteinID:
XP_018517152
UniProt:
A0AAJ7LB36
LinkDB
All DBs
Position
LG7_1:7686049..7692739
Genome browser
AA seq
725 aa
AA seq
DB search
MPEEMHQEEEAETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTD
PSKLDSGKDLKIDIIPNKADRTLTLIDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGA
DISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVKVDNGEPVGRGTKI
ILYLKEDQTEYIEEKRIKEIVKKHSQFIGYPITLFVEKERDKEISDDEAEEEKAEKEEKE
DGEDKPKIEDVGSDDEEDSKDKDKKKKKKIKEKYIDQEELNKTKPIWTRNPDDITNEEYG
EFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLFENKKKKNNIKLYVRRVFI
MDNCEELIPEYLNFVRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFAELAED
KENYKKFYEAFSKNIKLGIHEDSQNRKKLSELLRYHSSQSGDETTSLTEYLSRMKENQKS
IYYITGESKDQVANSAFVERVRKRGFEVLYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLE
LPEDEEEKKKMEEDKAKFESLCKLMKEILDKKVEKVTVSNRLVSSPCCIVTSTYGWTANM
ERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKADADKNDKAVKDLVILLFETA
LLSSGFSLDDPQTHSNRIYRMIKLGLGIDDDDVPTEEATSTAVPDEIPPLEGDGDDDASR
MEEVD
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaaatgcaccaagaggaggaggctgagacctttgccttccaggcagagatt
gctcagctgatgtccctgattatcaacaccttctactccaacaaagagatcttccttagg
gagttgatctccaatgcttctgatgcattggacaaaatccgctatgaaagcttgactgac
ccctccaagctggacagtggcaaggatctgaagattgacatcatccccaacaaagctgac
cgcaccttgaccctcatcgacactggaatcggcatgaccaaagccgacttgattaacaac
ctgggtaccatcgctaagtctggcaccaaggccttcatggaggccctgcaggctggagct
gacatctctatgattggtcagtttggtgtgggtttctactctgcctaccttgttgctgag
aaagtggtcgtcatcaccaaacacaacgatgatgagcagtatgcctgggagtcctctgcc
ggaggttccttcacagtcaaggtcgacaacggcgagcctgttggccgtggaacaaagatc
atcctgtacctgaaggaggaccagacagagtacattgaggagaagaggatcaaggagatt
gtcaagaagcactctcagttcatcggctaccccatcaccctgtttgtggagaaggagcgt
gacaaggagatcagcgacgacgaggccgaggaggagaaggcagagaaggaagagaaggag
gatggtgaggacaagccaaagatcgaggatgtgggctcagatgacgaggaggactccaaa
gacaaggacaagaagaagaaaaagaagatcaaggagaagtacatcgaccaggaggagctg
aacaagaccaagcccatctggaccagaaaccctgacgacatcacaaacgaggagtacggc
gagttctacaagagtctgaccaacgactgggaggatcacctggctgtcaagcacttctca
gtggagggccagcttgagttccgggctctgctctttattccccgccgtgcaccttttgac
ctctttgagaacaagaagaagaagaataacatcaagctgtacgtcaggagagtcttcatc
atggacaactgtgaagaactcatcccagagtacctgaacttcgtccgtggtgtggtggac
tcagaggacctgcccctcaacatctccagagaaatgctgcagcagagcaagattctcaag
gtcatccgcaagaacatcgtcaagaagtgtctggagctctttgccgaactggctgaggac
aaggagaactacaagaagttctacgaggctttctccaagaacatcaagctgggtatccac
gaggactcacagaaccgcaagaagctgtctgagctgctgcgctaccacagctcccagtct
ggagatgagaccacctccctcacagaatacctttctcgcatgaaggaaaaccagaaatct
atctactacatcaccggtgagagcaaggatcaggtggccaactccgcctttgtcgagcgt
gtccgcaagcgtggctttgaggtcctgtacatgacagagcccattgatgagtactgtgtc
cagcagctcaaggagtttgatggcaagagcctggtctctgtcaccaaggagggcctggag
ctgccagaggacgaggaggagaagaagaagatggaggaggacaaggctaagtttgagagc
ctctgcaagctcatgaaggagatccttgacaagaaagtggagaaggtgacagtgtccaac
agactggtgtcctcaccctgctgcattgtgacaagcacttacggctggacggccaacatg
gagaggatcatgaaggcccaggcactcagggacaactccaccatgggctacatgatggcc
aagaagcacctggagatcaaccctgaccaccccatcgtggagactctcaggcagaaggcc
gacgctgacaagaacgacaaggctgtgaaggacctcgtcatcctgctgttcgaaactgcc
ctgctgtcctcaggcttctccctggacgacccacagacccactccaaccgcatctacaga
atgattaagctcggactgggcatcgatgacgacgatgttcccacagaggaggccacctct
acagccgtcccagatgagattcctcccctagaaggcgatggtgacgatgatgcttcacgc
atggaagaagttgattaa
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integrated database retrieval system
