Lates calcarifer (barramundi perch): 108873503
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Entry
108873503 CDS
T04895
Name
(RefSeq) probable arginine--tRNA ligase, mitochondrial
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108873503
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lcf01007
]
108873503
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcf03016
]
108873503
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108873503
Enzymes [BR:
lcf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
108873503
Amino acid related enzymes [BR:
lcf01007
]
Aminoacyl-tRNA synthetase
Class I (G)
108873503
Transfer RNA biogenesis [BR:
lcf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108873503
Prokaryotic type
Other AARSs
108873503
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
108873503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
108873503
NCBI-ProteinID:
XP_018517228
UniProt:
A0A4W6EIY1
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All DBs
Position
LG7_1:complement(6995341..7001992)
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AA seq
579 aa
AA seq
DB search
MACFFRRRIAAKLGRALQQSEDVFIPALSAVPLFKKQKTADFKLSVNMLRTNGLLPSSGD
IKLQAENLAAQLKPDSLVEDISADHGVVSFTVNRKLFVQKMLEPFGKQGDEKFGLNSELF
NNLKRGTTLVEYSSPNIAKKFHAGHLRSTIIGNFIANLKQSLGYNVIRMNYLGDWGMQFG
LLGAGFGQFGCQERLKQNPLQHLFEVYVQMNKEAEHNENLKHAAQDFFRQLEQQECQAVS
LWQQFREITVNEYQQVYKRLGIHFDIYSGESCHLDQAQKVVQQLQSQGLLKTSERGTGVV
DLSPDGDMSSVCTVLRSNGTTLYITRDLAAAIDRKLTYHFDEMIYVTDKSQSNHFQQLFQ
ILLAMGHSWAERCQHVPFGLVQGMKTRTGEVVFLEDVLDEARARMLDNMSQSKTTKEMDD
PEDTAEKVGISALIVQDFKGPLQSDYKFDWDRMLQAQGDTGVFLQYTHTRLCSLIRRNEG
IEAATFDPSLLLEQTSITILQHLLRYDEVLYQSAQDLQPKHLVNFLLKLCHLIAFAHRQL
PVKGSPQDVAQARLRLFNGACSVLANGMRILGITPVDKM
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcatgtttctttagaagaagaattgcagcgaagctgggtagggcgctgcagcagtct
gaagatgtcttcatacctgctctatcagcagttccactctttaagaaacagaagactgct
gacttcaaactgtcagtcaacatgttacgaaccaatgggcttttaccatccagtggagac
attaagttgcaggcagaaaacttggctgcacagttgaagccagacagtttggtggaagac
atatctgctgatcatggagtggtcagctttacagttaatcgcaagctttttgttcagaaa
atgttggagccatttggaaagcagggggatgagaaatttgggttaaatagtgaacttttt
aataacctcaagagaggaacaacattagtggaatacagctctccaaatattgccaaaaaa
ttccatgctgggcacttgcgatctacaattattggtaacttcattgctaacttaaagcaa
tccctcggatacaatgttattcgaatgaactaccttggagactggggtatgcagtttggt
ttgctgggggctgggtttggccagtttggatgtcaggagagactgaaacagaatccttta
cagcatttgtttgaggtgtacgttcaaatgaacaaggaggcagagcacaatgagaatttg
aagcatgctgcccaagacttctttagacagctggagcagcaggagtgtcaggctgtgtcg
ttatggcaacagttcagagagatcacagtgaacgagtatcaacaggtttacaagcggtta
gggatccactttgatatttactccggggagtcctgtcacctagatcaagcccagaaagtg
gtgcagcagctgcaaagccaaggcctgttgaaaacctctgagaggggaactggtgtggtg
gatctttcccctgatggagacatgagcagcgtctgcacagtgctccgcagcaacggcaca
actctctacatcaccagagatcttgctgcagccattgaccgaaaactaacgtaccacttt
gatgagatgatttatgtgacagataaaagtcaatcaaatcacttccagcagttgttccag
atactgctcgctatgggacattcctgggctgagaggtgtcagcatgtgcccttcggcctg
gtacagggcatgaagacccggaccggtgaggtggtgtttctggaggacgtgctggacgaa
gctcgggcccggatgctggacaacatgagccagtcaaaaacaacaaaggaaatggacgat
ccagaggacacagcagagaaagtgggaatcagtgcactaatagttcaggacttcaaaggt
cccctgcagtcagactataagtttgactgggacaggatgctgcaggctcagggagacaca
ggtgtcttcctccagtacacgcacactcgactctgcagtttaatacggaggaatgaaggt
atagaggcagctacgtttgatccatccctccttcttgaacagacgagtatcaccatcctg
cagcacctccttcgctatgatgaggtgttgtaccagtcagcccaggatcttcaaccgaaa
cacctagtcaactttttattgaagctatgccacctgattgctttcgcacacagacagctg
ccagtgaaaggaagccctcaggatgttgcacaggcaaggttacgactgttcaacggagcc
tgctcagtactggccaacgggatgaggatcctcggcatcacaccggttgataaaatgtga
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