Lates calcarifer (barramundi perch): 108873511
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Entry
108873511 CDS
T04895
Name
(RefSeq) cannabinoid receptor type 1A
KO
K04277
cannabinoid receptor 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108873511
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108873511
G protein-coupled receptors [BR:
lcf04030
]
Rhodopsin family
Others
Cannabinoid
108873511
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
T4SS_CagC
Motif
Other DBs
NCBI-GeneID:
108873511
NCBI-ProteinID:
XP_018517254
UniProt:
A0A4W6EK35
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Position
LG7_1:complement(7008678..7018747)
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AA seq
469 aa
AA seq
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MKSVLDGVADTTFRTITSGLQYLGSNDANYDDPTNNVDFKGSFSLQKPLSAFRSNSFPNK
VPPDEELILKGIPFYPTNATDLFGNRSTFRDETENIQCGENFMDMECFMILTPSQQLAVA
VMSLTLGTFTVLENLVVLCVILQSRTLRCRPSYHFIGSLAVADLLGSVIFVYSFLDFHVF
HRKDSPNVFLFKLGGVTASFTASVGSLFLTAIDRYISIHRPLAYRRIVTRTKAVIAFCMM
WTISIIIAVLPLLGWNCKRLNSVCSDIFPLIDENYLMFWIGVTSVLVLFIIYAYIYILWK
AHHHAVRMLSRASQKSLVVYSADGTKVQTTRPEQARMDIRLAKTLVLILVVLVICWGPLL
AIMVYDLFWKMDDDIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFLSSCHACRGSAQ
QLDNSLESDCQNRHANISANRAAESCVKTTVKIAKVTMSVSTETSAEAV
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctgtgctggatggtgtggcagacaccaccttccggactattacatctggttta
cagtatctgggctccaacgatgctaactatgacgaccccaccaataatgtagacttcaaa
ggcagcttctctctgcagaagcccctgtctgctttccgcagcaactccttcccaaacaaa
gtacctccagatgaggagctcatcctcaagggcatccccttctaccccaccaacgccaca
gacttgtttggcaacaggagcacattcagagatgagactgaaaatatacaatgtggggag
aactttatggacatggagtgtttcatgatcctgactcccagccagcagctggctgtggct
gtgatgtctctgactctgggtaccttcacggtgctggagaacctagtggtgctctgcgtc
attctgcagtcccgcaccctccgctgccggccgtcctaccacttcatcggcagcctggct
gtggctgacctgctgggcagtgtcatctttgtctacagctttctggacttccatgttttc
cacaggaaggacagccctaatgtttttctcttcaagctgggtggagtcacagcatcgttc
acagcgtctgtgggaagccttttcctcacagctattgaccgctacatctccatacaccgg
cctctcgcctacaggcgcattgtgacacggaccaaggctgtcatagccttttgtatgatg
tggaccatctccatcatcatcgcagtgctacctctgctgggctggaactgtaaacgtctc
aattctgtttgctcagacatattccctctaattgacgagaactacctgatgttctggatc
ggtgtaaccagtgtgctggttcttttcatcatctacgcctacatatacatcctgtggaaa
gcacaccaccatgctgtgcgcatgctgagccgggcctcccagaagagccttgttgtttac
tcagcagatgggactaaagtgcagaccacgcgccccgagcaggcacgcatggacatccgc
ctggccaagaccctggtgctcatcttggtggtgctggtcatctgctgggggccgctgctc
gccatcatggtctatgacctcttctggaagatggacgatgacatcaagacagtatttgca
ttctgcagcatgctctgcctgctcaactccaccgtcaaccccatcatttacgccttgagg
agcaaggacctgcggcacgccttcctcagctcctgtcatgcctgcaggggcagtgcccag
cagttggacaatagcctcgagtcagactgccagaacagacatgccaacatttctgccaac
agggctgcagagagctgcgtgaagaccactgtgaaaatagccaaagtaacaatgtctgtg
tcaactgaaacttctgcagaagctgtctaa
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