Lates calcarifer (barramundi perch): 108873547
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Entry
108873547 CDS
T04895
Name
(RefSeq) ras homolog family member Ca
KO
K04513
Ras homolog gene family, member A
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04081
Hormone signaling
lcf04144
Endocytosis
lcf04150
mTOR signaling pathway
lcf04270
Vascular smooth muscle contraction
lcf04310
Wnt signaling pathway
lcf04350
TGF-beta signaling pathway
lcf04510
Focal adhesion
lcf04517
IgSF CAM signaling
lcf04519
Cadherin signaling
lcf04520
Adherens junction
lcf04530
Tight junction
lcf04621
NOD-like receptor signaling pathway
lcf04625
C-type lectin receptor signaling pathway
lcf04810
Regulation of actin cytoskeleton
lcf05100
Bacterial invasion of epithelial cells
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108873547
04350 TGF-beta signaling pathway
108873547
04150 mTOR signaling pathway
108873547
09133 Signaling molecules and interaction
04081 Hormone signaling
108873547
04517 IgSF CAM signaling
108873547
04519 Cadherin signaling
108873547
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108873547
09144 Cellular community - eukaryotes
04510 Focal adhesion
108873547
04520 Adherens junction
108873547
04530 Tight junction
108873547
09142 Cell motility
04810 Regulation of actin cytoskeleton
108873547
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108873547
04625 C-type lectin receptor signaling pathway
108873547
09153 Circulatory system
04270 Vascular smooth muscle contraction
108873547
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108873547
05100 Bacterial invasion of epithelial cells
108873547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108873547
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108873547
04031 GTP-binding proteins [BR:
lcf04031
]
108873547
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
108873547
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108873547
Exosomal proteins of other body fluids (saliva and urine)
108873547
Exosomal proteins of colorectal cancer cells
108873547
Exosomal proteins of bladder cancer cells
108873547
GTP-binding proteins [BR:
lcf04031
]
Small (monomeric) G-proteins
Rho Family
RhoA/B/C [OT]
108873547
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
SRPRB
VASP_tetra
Motif
Other DBs
NCBI-GeneID:
108873547
NCBI-ProteinID:
XP_018517315
UniProt:
A0A4W6EJB3
LinkDB
All DBs
Position
LG12:7778463..7793700
Genome browser
AA seq
193 aa
AA seq
DB search
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDT
AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD
LRNDEHTRRELAKMKQEPVKVDEGRDMAGRISAFGYLECSAKTKDGVREVFEMATRAALQ
VRKRKKRSGCTLL
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggcagccattcggaagaagctggtgattgttggggatggagcttgcggaaaaacatgt
cttcttattgttttcagtaaagaccagtttcctgaagtctacgtcccaacagtgtttgag
aactacatcgctgatatcgaggttgatggaaagcaggtggagttggcgctgtgggatacc
gcaggccaagaggactatgacaggctgaggcctctctcctacccggacacagatgtcatc
ctcatgtgtttctccattgacagccctgacagtttagaaaatatccctgagaagtggaca
cccgaggtgaagcacttctgtcccaatgttcccatcatcctggtggggaacaagaaggac
ctgaggaatgacgagcacacacggagagagctggccaagatgaaacaggagccagtgaag
gtggacgaaggcagagatatggccggcaggatcagtgcttttggctacttggagtgctct
gccaagactaaggatggcgtgcgggaggtgtttgagatggccactagagcagcgctgcag
gttcgcaagcgcaagaagagaagcggctgcactctgctgtga
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