Lates calcarifer (barramundi perch): 108873554
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Entry
108873554 CDS
T04895
Name
(RefSeq) pre-miRNA 5'-monophosphate methyltransferase
KO
K25191
RNA 5'-monophosphate methyltransferase [EC:2.1.1.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcf03016
]
108873554
Transfer RNA biogenesis [BR:
lcf03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
108873554
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bin3
Methyltransf_31
Methyltransf_25
Methyltransf_36
Methyltransf_12
Methyltransf_32
DUF6961
Motif
Other DBs
NCBI-GeneID:
108873554
NCBI-ProteinID:
XP_018517324
UniProt:
A0A4W6E324
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Position
LG12:complement(8175455..8188786)
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AA seq
251 aa
AA seq
DB search
MAACQINSDSVEEINDPGAAPYGNFINYYTFNPPENRLSLIPATLLQDLGYSDGHQTTLI
LDVGCNSGDLSVAFYRHLVQEPVCGGESDRFKVHLLGFDLDEALIQRAQQTNPLPSSISF
IPLDITTDADRLQDYLNQHGCSRFHLCLCLAVTMWVHLNHGDSGLLQLLSRLASISQYLL
LEAQPWKCYRSAARRLRKLGRSDFDHFKTLKIRGDIAEHARMHLERDCGMELMQSFGSTT
WDRKLLLFRRR
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatgtcagataaacagcgattccgttgaggaaataaatgatccaggagccgct
ccttacggcaactttataaactattacacctttaatcctccggagaaccgcttgagtctg
attccagccacgctccttcaggatttaggttacagcgacggccaccagaccactctgatc
ctggacgtgggatgtaattcaggggacctgagtgtagccttttataggcacctggtgcag
gagcctgtgtgcggaggagagtcagacaggttcaaagttcatctcctgggcttcgatctg
gacgaggctctcattcagagggctcagcagaccaaccctctgcccagcagcatctccttc
atccccctggacatcactacagatgctgaccggcttcaggattacctcaaccagcacggc
tgctcccgcttccacctgtgtttgtgcctggctgtcaccatgtgggtccatttaaaccac
ggagactctggcctgctgcagctactctctcgcctggcctccattagccagtacctcctg
ttggaggcccagccctggaagtgttaccgctctgcggcccgccggctgaggaaacttggc
cgctcagactttgaccacttcaagacactgaagattcgcggggacatagcagagcacgcc
aggatgcacctggagagagactgtggcatggagctcatgcagagctttggcagcaccacg
tgggaccgaaaactgctgctcttcagaaggagatga
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