Lates calcarifer (barramundi perch): 108873613
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Entry
108873613 CDS
T04895
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108873613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108873613
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108873613
Endosome - Golgi transport
Arf GTPase associated proteins
108873613
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
108873613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
RhoGAP
PH
PH_6
DUF7573
PH_13
Zf_1st_IFT121
Motif
Other DBs
NCBI-GeneID:
108873613
NCBI-ProteinID:
XP_018517421
UniProt:
A0AAJ7L9D9
LinkDB
All DBs
Position
Unknown
AA seq
1165 aa
AA seq
DB search
MTPPPSPPVPKPRARYQRDSLRSASSLERDGTDEHLQPAFSNEVHLSTDQGAPPLPPPAA
SDHGFIFPTLTGVTDIIAAKMPSLAGVAAAIGGSAPPDPPTPPGPTTPLSVDSMANSIAA
HIPSLAAAASTVANPAATSLNPASTTTPVPAANAGAATLNPASSTTTVPAANTGAASLDS
IFSSLANMPSFAGIMNGMANPAVSSTPSAPSPSSSRVRTTGDPQTDVGALSQLVTSCLDP
TAGVTLPPVDGAAEPSDEVLSPSHTVNPYVTVLACWGTEEADSESSNEEEEGVSSAPSGA
DGPMGADSALNATKNNVPMSPTGRIIPTRPAPPPPRPPDQSQKPGKRQKQKIPRAATIRV
SRKKGGSRTSTPQSAVVRSSWLDVWKGFRHNVLWATLDGQLMSLWKKRTDRFSEVLFHVS
SITNVKKQDKGRFSVYFRKKHYDFMAHSEEVQDGWVSSLLATRGQPSPTPPELHGQITIK
DTRSRAYAAIWGHDLWIYTNKDSYQLGIASFSVPLNVATVKSTGKHSFTLITPYKRFNLS
VDSSKDLSIWLDSLSSSICSALSCSQVATRLWENPDNKVCGDCGAANPEWASVNLLLVIC
QACAGQHRALGSNLSKVRSLRMDNKVWTEPLIQLFVTYGNRLANQVWAAAVPAAEQLLPE
ASDEERSKFIQDKYSRGRYRRVHALASSHSLMDQRLREVVCSDNVEETMSLICSGTKVCQ
SDPQGPSPILLAERAGQALQTELLRLNEYTEVPPHQPQSANRRPGSAPSGEEEEELHGKL
EEDRFLFSLENDSAACDVLDLREVLSVFLNDGPAHQFEMVTLSDQLICAADDKEALMTHL
VHILKVILPGGVSYAEVGGASAVSKVSVVEVGGASGHSDAWLLLWEDGVSIHPVHRHSQQ
RLAMELSVLTRHEMKPSENIITMATADRSVSLRFEEHHSCQSWFSHLERALTNHSSAPHH
PAANHSSARQSLYPVMDVGSRGLVPPGIERCISHVTAHGLKVEGVYRRCGLAAKVTRLVE
ALMTSPSSAPLENDEQGVLDAASALKQYVRQQQSLIPDIQLWVQAAVISDECSRFKAYRR
LLRQLPDDNRATLSALFGHFYMVQVFSQVNKMSAQNLALVLVPSLFQTLNHDLIGLTREF
IIHHTLLFLTPGGDQREEEEEITVF
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgactcctcctccttctcctccagtcccgaagcctcgagctcgttaccagagggacagt
ctgaggtccgcctcctccttggagagagatgggactgatgaacatctacaaccagctttt
tctaatgaagttcacctgagcacagatcaaggtgctcctcctcttcctcctcctgctgct
tcggaccatggcttcatcttcccgacgctcaccggtgtcactgacatcattgctgccaaa
atgccatcattggctggagtcgctgccgccattggaggttccgcccctccagacccccca
acccccccaggccccaccacccccctgtctgtagacagcatggctaacagcattgctgcc
cacatacctagcttagcagcagctgctagcactgtggctaacccagctgccactagctta
aaccctgcctccaccaccacaccagtacctgctgctaacgcaggtgctgctaccttaaac
cccgcctcctccaccacaactgtacctgctgctaacacaggtgctgctagtttagacagc
atctttagctcgttagctaacatgcccagttttgcagggattatgaatggtatggctaac
cctgctgttagctccaccccatcagccccatccccctcatcatcaagagttagaactact
ggagaccctcaaacagatgttggggcgctgtcacagctggtgacgtcatgtttagacccg
actgcaggagtcacattacccccagtagatggagctgcagagccgtcagatgaagtttta
tctccgtctcacactgtcaacccgtatgtcaccgtgttggcctgttggggaactgaggaa
gccgactctgagtcgtccaatgaggaggaagaaggagttagctctgccccctctggtgct
gatggaccaatgggagcagattctgctctgaacgcaactaaaaacaatgtcccaatgagt
cctacaggtcgtatcatccccaccaggccggctccgccccctccccgtcctcctgaccaa
tcacaaaagccgggaaaacgtcagaagcagaagatcccaagagcagccactattcgagtg
tcgaggaagaaagggggcagcaggacttcaactccacaaagcgctgtggtccgatccagc
tggctggacgtatggaaaggcttcagacataatgttttgtgggccacgctggacggacag
ctgatgtctctgtggaaaaaacgaacagaccggttcagtgaggtgttgtttcatgtctcc
agcatcaccaatgtgaagaaacaagacaaaggaagattctctgtttacttcaggaagaaa
cattatgacttcatggctcatagtgaagaggttcaggatggttgggtcagttctctgctg
gcgacccgaggccagccaagtcccactccccctgaactacatggacaaatcaccatcaag
gacacacggagccgagcctacgccgccatctggggtcacgacctctggatttacaccaac
aaagacagctaccagctgggcattgcctccttctctgtccccctgaatgtggccacagtc
aaatctacaggaaaacactcgtttaccctcatcactccatacaagagattcaacctgtct
gttgattcttcgaaggacctgtccatctggctggacagtctgtcctcgtctatctgcagt
gctctgtcctgcagccaggtggcaacacgtctctgggaaaatccagacaacaaggtgtgt
ggtgactgcggtgcagccaatcctgagtgggcgtcggtcaacctgctcctggttatctgt
caggcctgtgcaggtcaacatcgagctctgggcagcaacctgtcaaaggtacgcagtctg
aggatggacaacaaggtctggactgagccactcatacagctgtttgttacctatggcaac
cggctggccaatcaggtgtgggctgcagcagtgccagcagcagagcagctgcttcctgag
gcatctgatgaggagaggtcaaagttcatccaggataaatacagcagggggcgctacaga
cgagtccacgctctggcctcctcccactctctgatggaccagaggctgcgtgaggtggtc
tgcagtgacaacgtagaggaaacgatgtctctgatctgctcaggaacaaaggtgtgtcag
tcagaccctcagggcccctcccccatcctcctggctgagagggcaggtcaggctctgcag
accgagctgctccgactcaacgagtacacagaggtcccgcctcatcagccccaatcagcc
aataggagacctggctctgccccctcaggtgaggaggaggaggagcttcatggtaaactg
gaggaagatcgtttcctcttctcgttagaaaacgactcagcagcgtgtgacgtcctcgac
ctgcgagaggttctgtcagtcttcctcaacgacggaccggctcatcagttcgagatggta
acgctgagtgatcagctgatctgtgctgcagatgataaggaggctctgatgactcacctg
gttcacatactgaaggtgattctcccaggtggtgtgtcctatgcggaggtgggcggagct
tctgcagtcagtaaagtgagtgtggttgaagtgggaggagcttcgggtcattctgacgcc
tggttgttgctgtgggaggacggagtcagcattcaccctgtccatagacactcacagcag
agattggcgatggaactgagcgtgctcactcgtcatgaaatgaaaccatctgaaaacatc
atcaccatggcaactgcagacaggagtgtgtctttgcgtttcgaggagcaccacagctgt
cagtcctggttcagccacctggagagagccctgaccaatcacagctcagctccccaccat
cctgcagccaatcacagctcagctcgtcagtctctgtacccagtgatggacgtggggtca
agaggtttggtgccaccgggcatcgaacgctgcatctctcacgtcacagctcatggtctg
aaggtggagggcgtgtaccgccgctgtggcctcgctgccaaagtgacccgattggtggag
gccttgatgacatcaccgagctccgcccccctggagaatgacgagcagggcgtgttggac
gccgcctctgccctcaaacaatatgtccgccagcagcagagtttaatccctgacatacag
ctgtgggtgcaggccgcagtgatttcagacgaatgctccaggtttaaggcgtacagacgg
ttactacggcaacttcctgacgacaaccgagccaccctgagcgctctgtttggacacttc
tacatggtccaggtgttctctcaggtgaacaagatgtcggctcagaatctggctctggtt
ctggtcccgtctctgtttcagactctgaaccacgatctgattggactcaccagagagttc
atcatccaccacacactgctgttcctgacaccagggggcgatcagagagaggaggaggag
gagatcactgtgttctga
DBGET
integrated database retrieval system
