Lates calcarifer (barramundi perch): 108873657
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Entry
108873657 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor-interacting protein 2
KO
K20251
glutamate receptor-interacting protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108873657
Membrane trafficking [BR:
lcf04131
]
Protein recycling
Others
Glutamate receptor-interacting proteins (GRIPs)
108873657
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
DUF6288
Motif
Other DBs
NCBI-GeneID:
108873657
NCBI-ProteinID:
XP_018517484
UniProt:
A0AAJ7L9H0
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All DBs
Position
LG12:2574975..2710165
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AA seq
1186 aa
AA seq
DB search
MDKVERVMKMVKRMSPRKKRREGGGGRGGGPGELESPDTLCDELCRFSLCISDDGPYGKT
KDISGPDQTMASRRHSIPEALRGVTMVELVKKEGSTLGLTISGGTDKDGKPRVSNLRPGG
LAARSDQLNVGDYIKSVNGINLTKLRHEEIISLLKNVGERVLLEVEYELPPTAPDSTSGV
ISKTIDICLHKEGNSFGFRLTGGTQEDWHKSRPLVVTYVRPGGPADREGTLRPGDRLLSV
DGVPLHNANHSDALIVLAQCGQEALFQIEYDVTIMDTVTNASGPLLVEIAKSPGATLGIT
LTSANHRNKQVIVIDRVKPGSVVDRCGALHAGDHLLSIDGTSTEHCTVLEATQLLASTTE
LVKLEILPSHQTRLTGKQHDTVKVQKSDHPHSWDPCVNYCHPPNSTLCNTSSTLNKSWTA
SNNNTINSLDYCKSLVSASFSPGSTTTSGPSSQSSSTLPRPTVPMSPRNSLLKRRQRKKE
HKSSLSLASSSVGPGGQVVHVETSEVILTGDPLNGFGVQLQGGIFATETLSAPPLIRFIE
PDSSAERCGLLQVGDRLLSINGIPTEDGTLEEANQLLRDAALTNKVTLEIEFDVAESVVP
SSGTFHVKLPKKRGVELGLTISASKKPGEPLIISDIKKGSMAHRTGTLEPGDKLLAIDNI
RLENCSKDDAEQILQQCEELVKLKIRKDEDNSDEQETSGSIIYTVELKRYGGPLGITISG
TEEPFDPITISGLTKRGLAERTGAIHVGDRILAINSVSLKGKPLSEAIHLLQMAGETVTL
KIKKQLDSLEERKATEIEDTTENELSDPEEDDLTDSQQTNKLSELYSTTIPSVDSAMESW
DGSGLDAGYGSQGTYSNQAAGIALHPHEWRSAKQQQRSSTPPPGRRKNYPFSDGGFSEDD
WDKPPGFIGQQPDGILLDPDDSFWCQALEDLETCGQSELLREIEASIMTGTAISLGVDGV
NKPPAEPILSHNRMSPLRRNSLLHQGNLLHQGTHLHQGAHLHEEAHLHEEAQLHQDTHLH
QETHFNQEAHLHQGAQFHQDNQSPLLHHEPKPKASLRVSERTWESRRIKEEMQGILSPTP
LELHKVTVIKDPESDDFGFSVSDGFLEKGVYVNMIRPDGPADRAGLKPYDRILQVNHVRT
RDFDCCLAVPLITEAGDRLELVISRNPLANDDPEDNNNTLDHPLDL
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagtggagcgtgtgatgaagatggtgaagaggatgtcgcctaggaagaagagg
agagaaggaggaggaggaagaggaggaggacctggagagctggagagcccggacaccctg
tgtgacgaactctgccgcttcagcctctgcatcagtgatgacgggccatatggaaaaaca
aaggatatctctggaccagaccaaaccatggcctcaagaagacacagtataccagaagct
ctgcggggggtgaccatggtggagctggtgaagaaagaagggagcacgcttggcctcacc
atctcaggaggaactgacaaggatgggaaaccacgggtatcaaacctacggcctgggggt
ctggcagccaggagtgaccagctaaatgttggtgactacatcaagtcagtgaatggcatc
aatctgaccaaactgcggcacgaagagatcatcagtttactgaagaacgtaggagagaga
gttctgctggaggtggagtatgaactgcctcctacagcaccagacagcacctcaggggtt
atttcaaagacaatcgacatctgtttgcacaaagaggggaacagttttggttttcgtctt
acaggcggcacacaggaggactggcacaaatctcgccccctagtggtcacctatgtcagg
ccaggaggtccagcagacagagagggcacgctgcgtcctggtgaccgtctcctcagtgtg
gacggcgtgccgctgcacaatgccaaccacagtgatgccctcattgtgttggctcagtgc
ggccaggaagccctgttccagatagagtatgatgtcaccatcatggatacagtaacgaac
gcttctggtccactattagtggaaattgcgaagtcaccaggagcaacgctgggtatcacg
ctgacatcggccaatcatcgaaacaagcaggtcatcgtcatcgaccgggtaaaacctggc
agcgtggtggacagatgtggagcgttgcatgctggggatcacctgctgtccatagatggg
acgtcaacagaacactgcacagtcctggaggcaacacagctattggcaagcacaacagaa
ctggtcaaattggaaatactcccttcccatcaaacaaggctaactgggaaacagcacgac
acagtgaaggttcagaagtcagaccacccccactcctgggacccctgtgtaaactactgt
caccctccaaactccaccctctgcaacacaagctccaccctcaacaagtcgtggaccgcc
tcaaacaacaacaccatcaacagcctcgactactgcaagtctctggtatctgccagtttc
tctcccggctctacgaccacgtcgggccccagtagccagagctccagcactttgcccagg
cctacagttcccatgagtccacgtaattcactgctcaaacgacggcagagaaagaaagag
cacaaaagctccttgtccctggcgtccagttcggtgggtccgggcggtcaggtcgttcac
gtagagaccagtgaggtgatcttaacaggcgacccactcaatggcttcggtgttcagctt
caaggaggaatatttgccactgaaacactgtctgcacccccactcatccgattcatagag
cccgacagctctgcagagaggtgtggcctgcttcaggttggagaccgcctcctgtcaatc
aacggaatcccaacagaagacggaacactggaggaagccaatcaacttctccgagatgcg
gctctgaccaataaggtcacgctggagatagaatttgatgtagcagagtcagtggtgcct
agtagcggtactttccacgtcaaactgccgaagaagagaggagtggagctggggctcacc
atcagtgccagtaagaagccaggggagcccctcatcatctctgacatcaagaaaggcagc
atggcccacagaacaggaactttggagcctggtgataagctgttggccattgacaacatc
agacttgagaactgctccaaagacgatgcagagcagattctccagcagtgcgaggaactg
gtaaaactaaagatccgcaaagatgaagacaactcagatgagcaggagacatcaggcagc
atcatctacacagtggagctgaagcggtacggaggccccttgggtatcaccatctcaggc
actgaggagccttttgaccccatcactatatctggcctaaccaagagaggcctggccgag
aggacaggggctattcatgtaggggatcggatcctggctatcaacagcgtcagtcttaaa
ggcaagcctctgagtgaagccatccacctgctgcagatggctggagagacagtcaccctc
aagataaaaaagcaacttgacagtttagaggagaggaaagcaacagagatcgaggacaca
acagaaaatgagctgagtgaccctgaggaggacgatttgacggacagccaacagaccaat
aagctttctgagctttactccacgaccatacccagtgtggactctgccatggagtcatgg
gatggctcaggactggacgccggctatggcagccagggcacatacagcaatcaagcagcc
ggcatcgccctccaccctcatgagtggcgtagcgccaagcagcagcagcgcagcagcaca
cctccacctggacgccggaagaactaccccttcagcgacggagggttcagtgaggatgac
tgggacaaaccaccaggattcattggccaacaaccagatggtattctgttggatccagat
gacagtttctggtgtcaggcgctggaggatctggagacctgcggccagtcagaactactc
agagagatagaggcatccatcatgacaggcacagccatcagtctgggcgtagatggtgtc
aacaagcctccagctgagcccatattaagccacaacaggatgagcccattgcggagaaat
tctctcctgcaccagggaaacctgctgcaccagggcacacacctccaccagggggcccat
ctgcacgaggaggcccacctgcatgaagaggcccaactccaccaagacacccacctgcac
caggagacccatttcaaccaggaggcccacctgcatcagggggcccaattccaccaagat
aaccaatctccactcctgcaccacgagcccaagcccaaggcctcattaagagtgtcagag
agaacgtgggagtctcgtcggatcaaggaggagatgcaggggattctgtccccaacgcct
ctggagctgcacaaagtaaccgtgataaaggacccagagagcgatgactttggtttcagt
gtttcagacggtttcttggagaagggagtttatgtcaacatgatcagacctgacgggcca
gcggaccgagccgggctcaaaccctacgacaggatcctgcaggtgaaccatgttaggacg
agggactttgactgctgcctggcggtgcctctcatcacagaggctggagacagactggag
ctggtcatcagccgcaacccactggccaacgatgatccagaggacaataacaacacttta
gaccacccgctagacctgtaa
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