Lates calcarifer (barramundi perch): 108873743
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Entry
108873743 CDS
T04895
Name
(RefSeq) liprin-beta-1
KO
K27096
liprin-beta
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108873743
Membrane trafficking [BR:
lcf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108873743
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
108873743
NCBI-ProteinID:
XP_018517547
UniProt:
A0A4W6C9M2
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Position
LG18:complement(10320363..10346105)
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AA seq
880 aa
AA seq
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MMSDASEMLAAALEQMDGIIAGSKAMDYSNGLFDCQSPTSPFLGGLRVLHLLEDLRAALE
LMDNEERDNLRCQIPDSTAEGLAEWLQGRLTNGHSSEAVYQERLSRLESDKECLILQVSV
LTDQVEVQGEKIRDLDTCLEHHREKLNATEELLQQELLNRTALETQKLELMTEVSSLKLK
LTAVERDHRDNEGLYQEVTDLRFRVTDIENERLQCEKKLKATKEELQLLQRQLEERELEL
RRLRDESRLKVESHNRAEGGDRDIEMLKMKRALQTLTSTNDEKERRIKELEESLIKCKKV
QEMVKEKLKEDDYDDIPDDPSVPGAMEVDQVTLVLEGEAGRSSGESIPCIAVLSEMNELD
RERQLQAAESSASSTDQANNKGSSSPSKTNTTSDESFGTKKARASFGRGFFKLRGGKQTA
SAPNLAETERKGTDHLDLAGVPPRKSHDAAALPSSLETKKKSKGFKRFFGRLKRSHSTSF
NLDDAAEMEFRRGGVRATAGPRLGWSREPKHNAVDVPFSRWSKEDVCAWLHEQGLGLYAA
QGQSWIKSGQTLLQASQHDLEKELGMKQPLHRKKLQLALQALGSEEDDLKGKLDHNWVTR
WLDDIGLPQYKSHFDEARVDGRMLHYMTVEDLLSLKVGSVLHHLSIKRAIQVLRLNFYEP
SCLRRRPSDENNITPAEISQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLMVLEPRFNV
EALALLLNIPPNKTLLRRHLATHFHLLVGSEAQRLKQDCLENPDYTVLTATAKVKPRRLS
FGGFGTLRKKRHDDGEEYVCPMNVEMPKSSSFQRGVRIYEDNLDHLEQMEDSEGTVKQIG
AFSEGINNLTSMLKDDEFFQEISVCHPEVNVAETHDNSDI
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgacgccagtgagatgttggcagcagccttggagcaaatggatgggatcata
gcaggctccaaggctatggactactccaatgggctttttgactgccagtcacccacgtca
cctttcttgggtggcctccgggtgctgcatcttctggaagacctgcgagcagcgctggag
ctcatggacaatgaggagagggacaacctgcgatgtcagatccctgattccactgcagag
ggactggcagagtggctgcaaggacgattgactaacgggcacagctcagaagcagtttac
caagaacgtctgtcacgactagagagtgacaaagagtgtctcattcttcaggtaagtgtt
ttaacagaccaggtggaggtgcaaggtgaaaagattcgggaccttgacacctgccttgag
catcatcgggagaaactaaatgctactgaggagctgcttcaacaggaactgttgaaccgg
acagcactggagacccagaagcttgaactgatgaccgaggtgtcaagtctgaagctgaag
ctaacggctgtggaaagagatcacagggacaatgagggcttgtaccaggaagtaacggac
ctgcggttcagggtgactgatatagagaatgaaaggctgcagtgtgagaagaaactcaaa
gctaccaaagaggaattgcagcttctgcagaggcagctggaggagcgagagttggagctg
aggaggctgagggatgagagcaggctgaaggtggagagccacaacagagctgagggagga
gaccgagatatagaaatgttgaagatgaagagggcgttgcagacactgacgtcaaccaac
gatgaaaaggagaggaggataaaagagctggaggagtcgcttatcaaatgcaagaaagtg
caggagatggtcaaagagaagttgaaggaagacgattatgacgatatcccagatgatccc
tcagttcctggagccatggaggtggatcaggtcaccctggtgttggagggggaggcagga
aggagctctggcgagtctattccatgtatagcagtgctctctgagatgaatgaactggac
agagaacgtcagttacaggcagcagaaagctcggccagcagcactgaccaggccaataat
aaaggttcctcctctccgtctaaaacaaacaccacgagtgatgagagttttggtaccaag
aaagcccgcgcctctttcggccgtggattcttcaagctgcgtgggggcaagcagaccgcc
agcgctccgaacctggctgaaacagagcgtaaaggcacagatcacctggacttggccggt
gttcctccacggaaatcccacgacgcagctgctctgccatcctcactggaaaccaaaaag
aagtccaaaggctttaagagattctttggcaggctaaagaggagccactctacctccttc
aacctcgatgatgcagctgagatggagttcaggaggggtggagtcagagccacagctggc
cctcgactcgggtggtcacgtgaaccgaaacacaatgctgttgatgttcctttctcgcgc
tggagtaaggaagacgtttgtgcgtggctgcatgagcaaggcctcgggttatatgcagcc
cagggccagagctggatcaaatcaggacaaacactgctgcaggcatcacagcatgatctg
gagaaggagctgggcatgaagcagcctctccacaggaagaagctgcagctggccttgcag
gctcttggctcagaagaggacgacctgaagggcaaactggaccacaactgggtgaccaga
tggctggatgacattggcctcccacagtacaaaagtcactttgatgaggctcgtgttgat
ggacgcatgctgcactacatgacagtggaggacttgctgtctctgaaggtgggcagtgtt
ctccatcacctcagcatcaagagagccattcaggtcctccgcctcaacttttacgaaccc
agctgtctcaggcgacgaccttctgatgagaacaacatcacaccagcagagatctcacag
tggaccaaccacagagtgatggagtggctcagatctgtggatttggctgagtacgcccca
aacctgagagggagcggcgttcatggaggactgatggtgctggagccgcgtttcaacgta
gaggcgctcgcccttctgctcaacattcctcccaacaaaaccctgctgagacgccacctg
gccacacatttccacctgctcgttggctcagaggcacagaggctcaaacaggactgtctg
gaaaacccagactacaccgtcctcaccgccaccgccaaggtcaagcctaggcgcctgtca
ttcggtgggtttggcaccctgagaaagaaacgtcatgatgatggtgaggagtacgtctgc
cccatgaacgtggaaatgcccaaaagcagcagcttccagaggggggtccgaatctacgag
gataaccttgaccacctggaacagatggaggactctgaggggactgtcaaacagatagga
gcgttttctgagggaatcaacaatctgacgagcatgctgaaggatgacgagtttttccag
gagatctcagtctgccatccagaggtaaacgtcgcagagacgcacgacaactccgacata
tga
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