Lates calcarifer (barramundi perch): 108873746
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Entry
108873746 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: calnexin-like
KO
K08054
calnexin
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04141
Protein processing in endoplasmic reticulum
lcf04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108873746
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108873746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lcf03110
]
108873746
04131 Membrane trafficking [BR:
lcf04131
]
108873746
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
lcf04091
]
108873746
Chaperones and folding catalysts [BR:
lcf03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
108873746
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
108873746
Autophagy
ER-phagy
Other ER-phagy associated proteins
108873746
Lectins [BR:
lcf04091
]
L-type lectins
108873746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
PFF1_TM
FAM176
Piezo_TM1-24
SieB
Zip
Motif
Other DBs
NCBI-GeneID:
108873746
NCBI-ProteinID:
XP_018517552
UniProt:
A0AAJ7PCH1
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Position
LG8:24507916..24524602
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AA seq
624 aa
AA seq
DB search
MDQRVGLFVLLVAGLLCLSLAPISRADDLVEDGLDDDVDVEDELDLGLAGAEEEEELEGD
AQDEAPPAPKTPPTPKVTYKAPEPMGEHFFAESFDRGTLDGWVLSKAKKDDADEEIAKYD
GKWEVEEMKDSKLPGDKGLVLKSRAKHHAISAQLLRPFTFDTKPLIIQYEVNFQSGIDCG
GAYVKLLTQTPELNLDEFVDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGEYEEKHAKK
PDTDLRTYYTDKKTHLYTLVVNPDNSFEVLVDQTVVNSGSLLTDVTPPVNPPAEIEDPDD
HKPEDWDERPKIQDPDAVKPEDWDEDAPAQIPDEDAVKPDGWLDDEPEYIGDPDAVKPED
WDEDMDGEWEAPQIPNPACEAAPGCGAWKQPMIDNPNYKGKWKPPMIDNPNYQGVWKPRK
IPNPSYFEDLHPFRMTPFSAVGLELWSMTSDIFFDNFFITNDRNTADRWASDGWGLKKAA
EGAAEPGLAAQMISAAEERPWLWVVYVLTVALPLVLIIVFCCTGKKKSPATPAEYKKTDE
PQPDVKEEEEGEEEEGGEAEEAEEAEKSSPAAEKSDGEESPAEKEEEEAEKDEEKDEEKD
GTADEKLEEDVLRRSPRNRKVRRD
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggatcagagggttgggttgttcgttcttctggtggcgggcctcctctgcctcagcttg
gcccccatctctcgggccgacgacctggtcgaggacggtctggacgacgacgtggacgtg
gaggacgagctggatctgggtttggccggagctgaggaggaggaggagctggagggggac
gcgcaggatgaagctccgcctgctcctaaaactcctcctacacccaaggtgacctacaag
gctccagagccgatgggggaacatttcttcgccgagtcttttgaccgggggacacttgat
ggctgggttctgtccaaggccaagaaggacgacgctgatgaagagatcgcaaagtacgat
ggtaaatgggaggtggaggagatgaaggacagtaaactgcccggtgataaaggtctggtc
ctgaagtccagagccaaacatcacgccatctcagcccagctgctgcgacctttcaccttc
gacaccaaacccctcatcatccagtacgaggtgaacttccagtcaggtatcgactgcggc
ggcgcctacgtcaaactcctgactcagactcctgagctcaacctggacgagtttgtggat
aaaactccgtacaccatcatgttcggacccgacaaatgcggagaggattacaaactgcac
ttcatcttcagacacaaaaaccccaaaactggagagtatgaagagaagcacgccaagaaa
cccgacactgacctgaggacgtactacaccgacaagaagacacacctgtacacactcgtg
gtgaaccctgacaacagctttgaggtgctggtggatcagacggtggtgaacagcggcagc
ctgctgacagatgtgaccccgcctgtgaacccccccgctgagatcgaggaccccgacgac
cacaaaccagaggactgggacgagaggcccaagatccaggacccagatgccgtcaagccc
gaggactgggacgaggacgctcccgctcagattccagatgaagacgcagtgaaaccagac
ggctggttggacgacgagccggagtacatcggagaccccgacgctgtcaaacctgaagac
tgggatgaggacatggacggcgaatgggaggctcctcagatccctaaccccgcctgtgag
gccgcccccggctgtggcgcctggaaacagccgatgatcgataaccccaactacaagggc
aagtggaagcctccgatgatcgacaaccccaactaccagggcgtctggaagccgaggaag
atcccgaacccctcgtacttcgaggacctgcacccgttcaggatgactccgttcagcgcc
gtgggactcgagctctggtccatgacctccgacatcttcttcgacaacttcttcatcacc
aacgaccgcaacaccgccgaccgctgggcctccgacggctgggggctgaagaaggcagca
gagggcgccgctgagcctggtctggcagctcagatgataagcgctgcagaggagcgtccc
tggctctgggttgtctacgtcctcaccgtggctttaccactcgtcctcatcatcgtcttc
tgctgcaccgggaagaagaagagcccagcgacgccagcagagtacaagaagaccgatgaa
cctcagcccgacgtgaaggaagaggaggagggagaagaggaggagggaggagaggctgaa
gaggcagaagaggcagagaagagcagtccagctgcagaaaagagcgacggagaggaaagt
cctgcagagaaagaggaagaggaagcagagaaggacgaagagaaggacgaagagaaggac
ggcacggcagatgagaagttggaggaggacgttctgcggagatctcccaggaacaggaag
gtcagaagggactga
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