Lates calcarifer (barramundi perch): 108873839
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Entry
108873839 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: ninein-like protein
KO
K16477
ninein-like protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108873839
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
108873839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
TMF_DNA_bd
DUF5580_M
EF-hand_6
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
108873839
NCBI-ProteinID:
XP_050932487
UniProt:
A0AAJ8DVE1
LinkDB
All DBs
Position
LG16_LG22:126349..150118
Genome browser
AA seq
1786 aa
AA seq
DB search
MEEAEHSHYVAQLKAEFDSCDTTATGFLDREELTALCHKLQLDAHLPLLLDTLLGERTYG
RVNFEEFKEGFVAVLSRSLDFSTSEDDSSYLEPVVPEEVKPKFVKGAKRYGRRSRPDSEP
DAALTCDSEDSPPSRTEATDSSPAGVRRAKLRRSTSLESVESLKSDEEAGSQKNFQSKAP
QQEEVQLGIVGGGGGGGGGGHVLTAVCDHLGLTQLSTEELDLLLRKLDPDLDGRVSIRDF
QKVLCGSVPVSCSTPIRPADLQRAPHRSQSVLEERSARSTSPSLLTATVGQRVLSRLDDG
SGCTSPERVVALWTEEGIKNSQDILQTLDFPLEERLSLADLTLALDNELLVSGNGIHQAA
LISYKNEIQHLQVVAEQACRERDKVKADLDLADQRNLQLVREVDDRHASMETLNQSRIRD
LEQDFRDRLTALRSQSEQESEVLLQLAERERGSLQEELQLLRAQEAELQEELCSTAQENS
RLEEELSAVKLKLTEAESSVNKLQRDLDQLLHDKFGGLDPAGAGLSHEERFSEIIKEYEL
QCRELRDRNDELNSELELLKSQRSDRKSRRSAGDSALSWTEQRSASAESDSDDSDMKRSS
SPLVRKKLQPHDKTALCSLDSGSGPAVSIQTELALEQLKQKHNQELQQLHIQLETQVNYY
ERNVELMRQSMEVERKDISQAFKLEISELEEQKAQAEQQVKQLKEALDKLQTQIQHGGGG
GWSNEQERRVQRERAELEQNFAREISNLVQRLSAEKDQLEAELKLKMDQEVMLVREESEQ
QLCQMKLQHAEAQRRLLHQLHQERQLLQEQRGFWEKRLVLSEHEKLRSEERAGEERARIC
SQLSSEKRRMEEQHEEAVRQLKEVIQSSNLQIGQSEASLEEIRGRCAQLEDDLSASHGRC
SELEARLEEACAQLEESIAFLESHELLSKRLASEKSSVEEELQLVKAREEQLLVQVIQLK
EELGNVQAASDSIQQDRELVADNCSRLSNAFIQQQAQLRARDQTVSALRSELENLQEAMR
TKTECVSKLTAELDSLKTDRARLIQDLKDQAMAVDNLQLELDGVSEELERRSSTEESLQE
ALKQEQTRTLQLQSSLDEEKEEVCRLSQENSSYTRLADQLSTQIVEMEEEITTLRDHLRD
LSAQLNGTADLVLDLRRQLNSKTSEVDRLRAEVADLRQAKSSREKHCSDVQQLTVQLKTK
DVELDRVREQVQQLQRALQDSQNQLRTTEEDFEQEKRKMTQQLMELEKLVLALEEVMDPA
SPHRTQLEEVRSENGALQERLNVLQQEVQNLEDDVAKKRRRLEEMEREHERRREEEERLH
RENSKYREEVLDLSSRNLQLSNDNAELSARLRGDQESVRMLRERLATVSKEQEEEGATVR
RLQDAALQQEREKQQLQASWTQERQLLETELSCYKDKLGRLSELEAELSSVTLKQQWLEE
DKAKLLREAEARNDKVEKLQQSVLSLESEAELLRSQLAAVSREKLGHAQEVTELQRKLQD
AHDKVEELETSVRRLTREKEELRRAQEEQEEQASITLQEETHRLRVQNQELQNKLSELQV
QGLQVHKLTQEQQNLKTKLSELETARTQAEDQAARADTALGLVQAQHLRQLQELQERAGD
GPREQVELLQVRLQEEQRRSQQLEETLRIQAQQSCSQISIKQEQYEKAMASLQQRVEDLE
TKLKGVRMVLQEKVQQLKDQLAKNSKSTALLKDLYVENSQLMKALQVTEQRQKNAERKNV
VMEEKINALNKLLREIVLDVARHVEKHCSEIRFTEAASAVSRLWLA
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcggagcacagccactacgtcgctcagctgaaggcagagttcgacagctgc
gacacgacggccacgggcttcctggacagagaggagctgacggcgctctgccacaaactg
cagctggacgctcacctgccgctgctgctcgacacgctgctgggagaacgcacctacggc
agggtgaacttcgaggagtttaaagaaggcttcgtggccgtcctgtctcgctctctggac
ttcagcacgtcagaggacgacagcagttacctggagccagttgttccagaggaggtgaag
ccgaagttcgtgaagggagcgaagcgttacggccggcgctctcgtcctgacagtgaacct
gacgccgcgctgacctgcgactccgaggactcaccgccgtccagaaccgaggccacggac
tcgtcgcctgccggcgtccgcagggccaaactgaggcggtccacgtctctggagagcgtc
gagagcctgaagtctgatgaggaggcaggaagtcagaagaactttcagtctaaagctcct
cagcaggaggaggtgcagctgggcatcgtcggaggaggaggaggaggaggaggaggaggc
catgtcctgacagcagtttgtgatcacctggggctgacacagctcagtacagaggagctg
gacctgctgctcagaaagctggaccccgacctggatggcagagtcagcatcagggatttc
cagaaggttctctgtggctccgtccccgtctcctgctccacccccatacgacctgctgac
ctgcagagggcgccacacaggtctcagtcggtgttagaggagcgctcggctcgttccacc
tcgccctccctgctgacggccacagtgggtcagagagtcctcagccggctggacgacgga
tcaggatgcaccagccccgagcgggtcgtcgccctctggaccgaggagggcatcaagaac
agccaggacatcctgcagactctggacttccctctggaggagcgtctcagtctggcagac
ctgactctggctctggacaatgagctcctggtcagcgggaacggcatccaccaggcggcg
ctcatctcctacaagaacgagatccagcacctgcaggtggtggcggagcaggcctgcaga
gagcgtgacaaggtgaaagcagacctggacctggccgaccagaggaacctgcagctggtc
agagaggtggacgaccgccacgccagcatggagacgctgaaccagagcaggatcagggac
ctggagcaggacttccgtgataggctgacggctctgcgcagtcagtcggagcaggagagc
gaggtgctgctgcagctggcggagagggagcgcggctcgctgcaggaggagctgcagctg
ctgagagcgcaggaggccgagctgcaggaggagctctgcagcaccgcacaggagaacagt
cgtctggaggaggagctcagtgctgtgaagctgaaactgactgaagctgagagctcagtg
aacaaactgcagagagacctggaccagctgctgcacgacaagtttggtggtttggacccg
gctggcgctggactgagtcacgaggagcgattctctgaaatcatcaaggagtatgaactt
caatgcagggagctgcgggacagaaacgatgagctgaactcagagctggagctgctgaag
agtcagaggagcgacaggaagtccagacgatctgcaggagactccgcgctgagctggacc
gaacaacgctcagccagcgcagagtccgactctgacgactcggacatgaagcgcagctcg
tctccgctggtcaggaagaagctgcagccgcacgataaaaccgctctgtgctctctggac
agtggctctggtcctgccgtcagtattcagactgaactggctctggagcagctgaagcag
aaacacaaccaggagctgcagcagctgcacatccagctggagacacaggtgaactactat
gagcgaaatgtggagctgatgaggcagagcatggaggtggagcgtaaagacatctctcag
gccttcaagctggagatcagtgagctggaggagcagaaggctcaggcggagcagcaggtc
aagcagctgaaggaggctctggacaaactgcagactcagatccaacatggaggaggagga
gggtggagcaacgagcaggagcgcagggtgcagcgggagcgggcggagctggagcagaac
tttgcccgagagatcagtaacctggtccagagactgagcgcggagaaggatcagctggag
gccgagctgaagctgaagatggaccaggaggtgatgctggtcagggaggagtctgagcag
cagctctgtcagatgaagctgcagcacgctgaggctcagcgccgcctcctccaccagctc
caccaggagcgccagctgctgcaggagcagagaggattctgggagaagcgcctcgtcctg
tcagagcacgagaagctgcggagcgaggagagagccggggaggagcgggccaggatctgc
agccagctctcctcagagaagaggaggatggaggagcagcacgaggaggcggtccgtcag
ctgaaggaggtcatacagagctccaacctgcagatcggccaatcagaggccagtttggag
gagatccgagggcgctgcgctcagttagaggacgatctcagtgcctcccacgggcggtgc
tccgagctggaggccaggctggaggaggcctgtgctcagctggaggagagcatcgccttc
ctggagtctcacgagcttctgagtaaacgtctggcctcagagaagagctcggtggaggag
gagctgcagctggtgaaggccagagaggagcagctcctggtccaggtgatccagctgaag
gaggagctgggaaacgtccaggctgcgtccgacagcatccagcaggaccgggagctggtg
gctgataactgcagccgcctctccaacgccttcatccagcagcaggctcagctccgagcc
cgagaccagactgtgagcgccctgaggtctgagctggagaacctgcaggaggccatgagg
accaaaaccgaatgtgtctccaaactgactgctgaactggactcgttaaagacggaccgc
gccaggctgatccaggatctgaaggaccaggcgatggcagtggacaacctgcagctggag
ctggacggagtctcagaggagttagagaggaggagcagcaccgaggagagtctgcaggag
gctctgaagcaggagcagaccaggaccttgcagctccagtccagtctggatgaggagaag
gaggaggtctgtcgtctgagccaagagaacagcagctacacccggctggccgaccagctc
tccacccagatcgtagagatggaggaggagatcaccacgctcagagaccacctcagagac
ctcagcgcccagctcaatgggaccgcagacctggtcctggacctcaggaggcagctcaac
tccaaaaccagcgaggtggatcggctccgggccgaggtggcagatctacgacaagccaag
tcgtcccgtgagaagcactgcagcgacgtccagcagctgacggttcagctgaaaaccaag
gacgtagagctggaccgggtcagagagcaggtccagcagctgcagcgggccctgcaggac
tcccagaaccagctgaggacgacggaggaggactttgagcaggagaagaggaagatgacg
cagcagctgatggagctggagaagctggtcctggctctggaggaggtgatggacccggcc
agtccacacaggactcagctggaggaggttcgatcagagaacggagctcttcaggagcga
ctgaacgtcctgcagcaggaagtccagaacctggaggacgacgtcgccaagaagaggagg
agactggaggagatggagagagagcacgagaggaggagagaggaagaggagaggctgcac
agagagaactctaagtatcgagaggaggttctggatctgagcagcaggaacctgcagctg
agcaacgacaacgccgagctgagcgcccgtctccgcggagaccaggagtcggtccggatg
ctgcgggagcgcctggcgaccgtctccaaggagcaggaggaggagggcgctacggtgcgg
cggctgcaggacgcagcgctgcagcaggagagagagaagcagcagctgcaggcgtcctgg
actcaggagagacagctgctggagacagagctcagctgctacaaggacaagctgggccgt
ctgtcggagctggaggcagagctcagcagtgtgactctgaagcagcagtggttggaggag
gacaaggccaaactgctgagagaggccgaggcccggaacgacaaggtggagaagctgcag
cagtctgttctctctctggagtccgaggccgagctgcttcgctctcagctcgccgccgtc
agtcgggagaaactcggccacgcccaggaagtgacggagctgcagaggaagctgcaggac
gctcacgacaaggtggaggagctggagaccagcgtccggaggctgacgagggagaaggag
gagctgcgtcgggcccaggaggagcaggaggagcaggcctccatcactctgcaggaggag
acccacagactgagagtccagaaccaggagctccagaacaagctgtcagagctgcaagtc
cagggtctgcaggtccacaaactgacccaggagcagcagaacctgaagaccaaactgagc
gagctggagacggcgcggacgcaggccgaggaccaggcggcgcgggccgacacggcgctc
ggcctggtgcaggcgcagcacctgcggcagctgcaggagctgcaggagcgggcgggcgac
gggcccagggagcaggtggagctgctgcaggttcggctgcaggaggagcagaggaggagt
cagcagctggaggagacgctgaggatccaggcccagcagagctgctcccagatcagcatc
aaacaggagcagtacgagaaggcgatggcgtccctgcagcagagggtggaggacctggag
accaaactgaagggggtccggatggttctgcaggagaaagtccagcagctcaaagaccag
ctggcgaagaactccaagtcgacggcgctgctgaaggacctgtacgtggagaactctcag
ctgatgaaggctctgcaggtcaccgagcagcggcagaaaaacgccgagaggaagaacgtg
gtgatggaggagaagatcaacgccctcaacaagctgctcagagagatcgtcctggacgtc
gctcgccacgtagagaaacactgctctgagatcagattcactgaagcagcttcagcagtt
agcaggctgtggttagcctag
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integrated database retrieval system
