Lates calcarifer (barramundi perch): 108873852
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Entry
108873852 CDS
T04895
Name
(RefSeq) PH and SEC7 domain-containing protein 1 isoform X1
KO
K12494
PH and SEC7 domain-containing protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108873852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108873852
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108873852
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
108873852
NCBI-ProteinID:
XP_018517694
UniProt:
A0AAJ7L9Q7
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Position
LG16_LG22:177282..215754
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AA seq
986 aa
AA seq
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MSKDQREEIQDHSGAASSQSSSGVTGSLGDSSQLDRNDSLFPETSSQSSHDTADTGFGIQ
SDSGSATTPSLRSQKIARAKWEFLFGSQTEESRCSKADAPSTTPPTSGSPSPTPPSSLHL
KPANQRRGRDSEGHRLSHHEVRQIEVELVTLGPRGTNPKTGIIRRTIKYSETDLDAVPLR
CYRETDLDEVMRAEAEAAEEAEADSAFGSNRSVLGNSSFSPAGTSPKPRTGGGKEGDEEE
EEEEEEEEGVVSWASVRMQGDKQRQRAAKEEDEVFSLLLKGPLEALSDTHGGLKSPISVG
SPRRPSDSNLDSFSRHFESIMESHRAKGTSYSSLDSVDLLTSGSTSVFTFDLPTLTPEIQ
SQICDSAKQIIELSFAPLARPDPAASSEMSRSELTLSVSGAGLRGGSKDDSGPPVRSRSE
KDSWRRSILKDGFRKATSAPSLHSSPRERPVNRPPELLYPQADVAERLALGGSDEALANG
TKADLQAAKRLAKRLYNLDGFRKSDVARHLGKNNEFSQMVAEEYLSNFNFTGLTIDQALR
TFLRQFALMGETQERERVLAHFSRRYRQCNPESLNTEDSVHTLTCAVMLLNTDLHGNNVG
KRMSCSQFISNLEGLNDGKDFPKDLLKTLYSSIKNEKLQWTIDEEELRKSMSELADVRTD
SASHTMKRLGSGGNPLVGVAQQADGELYKSGFLVRKVHADPDGKRTPRGKRGWKSFYAML
KGLVLYLQKDEYRAERELTEEDVKNAVSIHHSLAMRAADYSKRPNVFYLRTADWRVFLFQ
APNAEQMQSWITRINVVAAMFSAPPFPAAIGSQKRFSRPLLPGSNTKLSQEEQVKSHENR
FRAVSSELADLTASTPDRKVKGRELEEHKLRQEYLEFEKTRYGTYAMLLRAKLSSGDEDL
TAFESRLFDDGGLQRAHSSPTLPQDTANKEKIRGTKTSKSLKVTSSSSSSTSKTGSASAR
EGSKKKNGSNQRPELQKQSSKPEEAP
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaggatcagagagaggaaattcaggatcacagcggggctgcatcctctcagagc
tccagcggggtgacaggcagcttgggagacagttcccagctggacagaaatgatagcctg
ttccctgaaacctcgagccagtccagccatgatacggcagacaccggctttgggatacag
tcagacagcggctcagcgacgactccgtccttgcgatcgcagaagatcgcacgagccaag
tgggagttcttgtttggaagccagacagaggagagtcgctgcagtaaagcagacgccccg
tccacaacgccaccaaccagcggctcgcccagccccacccctccctcctccctccacctg
aagccagccaatcagaggagggggcgggacagcgagggtcataggttgtcgcaccacgag
gtgcggcagatcgaggtggagctggtgacccttggcccccgaggcaccaaccccaagacg
ggcatcatccgccggaccattaaatactctgaaacggatctggacgctgttccgctgcgc
tgctacagggagaccgacctggacgaggtgatgcgggcggaggcagaggcagcagaggag
gcagaggcggactcagccttcggcagtaaccgcagcgtcctgggaaactccagcttcagc
ccagctggcacctccccgaaaccccggacaggtggagggaaggagggggatgaggaggag
gaggaggaagaggaggaggaggaaggagtggtgagctgggccagtgtcaggatgcaggga
gacaaacagagacagagagctgccaaagaagaggacgaggtgttcagtctgctgctgaag
gggcctttggaggcgttgtctgacacccacggtggcctcaagtctccgatctccgttggc
agcccccgccgaccttccgatagcaacctggactcctttagccgccattttgaaagcatc
atggagtctcatcgggccaaaggcacctcctacagcagcctggacagtgtcgacctgctg
acatctggatccacgtctgtgttcacctttgacctgccgacactcacccctgagatccag
agtcagatctgtgacagcgccaagcagatcattgagcttagtttcgccccgctggcccgt
ccggacccggccgcctcctcggagatgtctcgctccgagctcaccctcagtgtctcggga
gccgggctccgaggcggctccaaagacgactctggccctccagtccggtccagatcagag
aaagattcgtggcgtcgctccatcctcaaagatggcttccgaaaggcaacctctgccccc
tccctccacagcagccccagggagcgtccggtgaaccgccctcccgagctgctgtacccg
caggccgacgtggccgagcgtctggcgctcggcggcagcgacgaagcgctggccaacggc
accaaggccgacctgcaggccgccaaacgcctcgccaaacgcctctacaacctggacggc
ttcaggaagtctgacgtcgcccgacacctcggaaagaataatgagttcagtcagatggtg
gcggaggaatatctcagtaactttaacttcactggtctgaccatcgaccaggcgctcagg
acgtttctgagacagtttgctctgatgggagaaactcaggagagagagagagtcctcgct
cacttctccaggagatacagacagtgtaaccctgagagcctgaatactgaagacagcgtc
cacactctgacctgtgctgtcatgctgctgaacactgaccttcatggaaacaacgtgggg
aagaggatgtcctgcagtcagttcatctccaacctggaaggtctcaacgatggaaaagac
ttccccaaagatctgctaaagactctctacagctccatcaagaacgagaagcttcagtgg
acgattgatgaggaggagttgaggaagtcgatgtcggagctggccgacgtccgaacagac
tcggcctcccacaccatgaaacgactgggcagcggaggaaacccactggtgggtgtcgcc
cagcaggccgatggcgagctctacaagagcggcttcctggtccgcaaagtccacgctgac
cctgacgggaagagaacaccgcggggtaagagggggtggaagtctttctatgccatgctg
aaggggctggtactctatctgcagaaggatgagtaccgtgcagagcgagagctgacggag
gaggacgtgaagaacgccgtgtccatccatcactctctggccatgagagcggctgactac
agcaagagacccaacgtcttctacctgaggacggccgactggagagtcttcctgttccag
gctccgaacgctgaacagatgcagtcgtggatcacgcgcatcaacgtggtggcggccatg
ttttcagctcctccatttccagcggcgatcggctctcagaagaggttcagccgccctctg
ctgccgggatccaacaccaaactgtcccaggaggagcaggtcaagtcccacgagaaccgg
ttcagggcggtttcctccgagctggccgacctcacagcctccaccccggaccgaaaggtc
aaaggtcgtgagctggaggagcacaaactccgacaggagtacctggagtttgagaaaacc
cgttacggtacgtacgccatgctgctcagagccaagctgtcaagcggagacgaggacctg
acggccttcgagtctcgcctgtttgatgacggcggcctgcagagggcgcactccagcccc
acgctgcctcaggacactgccaacaaggagaaaatccgagggaccaagacttcgaaaagc
ttaaaggtcacgtcatcttcgtcctcttcaacctccaagaccggcagcgccagcgccagg
gagggaagcaagaagaagaatgggagcaaccagcggccagagctgcagaaacaaagcagc
aaaccggaggaggcgccgtaa
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