Lates calcarifer (barramundi perch): 108873884
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Entry
108873884 CDS
T04895
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108873884
04082 Neuroactive ligand signaling
108873884
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108873884
Ion channels [BR:
lcf04040
]
Ligand-gated channels
GABA-A
108873884
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
108873884
NCBI-ProteinID:
XP_018517739
UniProt:
A0A4W6DLT9
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Position
LG19:complement(362381..391896)
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AA seq
461 aa
AA seq
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MKRLFIRAVQDRAMNPWLLFALLGLCSAFGPSKQEEEDYEDVPINKTWVLSPKIYESDVT
LILNKLLQGYDNKLRPDIGVRPTVIETAVYVNSIGPVDPINMEYTIDIFFAQTWYDSRLK
FNSSMKLLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTLRLTIN
AECYLKLHNFPMDEHSCPLEFSSYGYPKNEIMYRWQRRAVEVADQRYWRLYQFAFVGLRN
TSDVAHTQSGEYVIMTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVPARTSL
GITTVLTMTTLSTISRKSLPKVSYVTAMDLFVSVCFIFTFAALMEYGTLHYFTSNRQTKK
AKANNNTQQKASSMVNIRPGTSLLQMNNIVPYHEEDDYAYECLDGKDCTSFFCCFDDCRS
GAWRENRMHVRVSKIDSYSRIFFPTAFGLFNLVYWIGYLYL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggctttttatcagagctgtgcaggacagagccatgaacccctggctgctcttc
gctctgctcggactctgttcagcatttggacccagtaaacaggaagaagaggactatgaa
gatgtgcccataaataagacctgggtcttatcaccaaagatctatgaaagcgatgtgact
ttgatcctaaataaactgctgcagggttatgataacaaactgcggcctgacattggagtg
agaccgacagtgattgaaacagctgtatatgtcaacagcattggacccgtggaccccatc
aacatggaatacaccattgacatcttctttgcccagacatggtatgacagccgactgaag
ttcaacagctcaatgaagttgctcatgcttaatagtaacatggtaggcaaaatctggatt
cctgacacattcttcaggaattcacgcaaatcagatgcccactggatcaccactcccaac
cgcctcctgagactgtggagcaatgggagagtcatgtacacactaaggttgactattaat
gcggagtgttaccttaagctgcataactttccaatggatgagcactcgtgcccactggag
ttttcaagctatggctatcccaagaatgagatcatgtaccggtggcagagacgggcagta
gaggtagcagaccagcggtactggagactctaccagtttgcctttgtagggttgaggaac
acctctgatgtggcacacacccagtcaggtgaatatgtaatcatgacgatcttttttgac
ctgagtcgaagaatgggctactttaccatccagacctacattccctgcagtatgattgtg
gtcttgtcctgggtctccttctggatcaataaggatgcagtcccagctcgcacatctcta
ggtatcaccacagttctcaccatgacaactctaagtaccatctccagaaagtccttgccc
aaggtttcttacgtcactgctatggacctgttcgtctctgtttgcttcatcttcaccttc
gctgccctcatggagtatggcactctgcactacttcaccagcaacagacagaccaagaag
gctaaagccaacaataacacacagcagaaagcatccagcatggtgaatatccgacctggg
acatccctgctgcagatgaacaacattgtgccgtatcacgaggaggatgattatgcttat
gagtgtttggatggaaaagactgcaccagcttcttctgctgcttcgatgactgtcgctca
ggtgcctggcgtgaaaacaggatgcacgtgcgggtttccaagattgattcttactcacga
atattcttccccaccgcttttggcctttttaatctggtttattggataggttatctgtat
ctataa
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