Lates calcarifer (barramundi perch): 108873897
Help
Entry
108873897 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: semaphorin-6D
KO
K06842
semaphorin 6
Organism
lcf
Lates calcarifer (barramundi perch)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
108873897
NCBI-ProteinID:
XP_050925241
UniProt:
A0AAJ8DNG3
LinkDB
All DBs
Position
LG3:complement(22625939..22772023)
Genome browser
AA seq
1171 aa
AA seq
DB search
MAPTDWLSPWRPPPLMLMLLLLVLSFCFLSESASTTPFPKDLEPINTVDSEQSYQYPGFQ
GLLQDNDTLRLGLDFQRMLRINHMLYIAARDHVFAVNLTTASEEFVPQLKLTWKSKDVSK
CTVRGKNSDECYNYVKVLVPRNDETLFACGXNAFNPTCRNYRMTSLEQVGEEVVGQARCP
FESGQSNVGLFAGGDFYSATMTDFLASDAVIYRSLGDGRPVLRTVKYDSKWLREPHFLHA
IDYGNYVYFFLSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSV
PGDSFFYFDVLQSLTNVLQINQRPAVVGVFTTQANSIPGSAVCAFYMDDIEKVFNGKFKE
QRTSDSSWTPVPDEQVPRPRPGMCAGDGPAAEYKSSVQFPDETLTFIKSYPLMDEAVPSV
NDRPCFTRTSSRSKLTQIVVDVSAGPYKDRTVMFLGSDDGRVLKVLASTHPNDSFGSKLL
EDIDVYNPSKCNVQGQEDRRVLGLELDKDHHALFVAFTSCVIRVPLSRCTQHGACKKACL
ASRDPYCIWLRTGSCANMAPGFKAGFEQDIEGDHSFHPDSCHADVLATTRNQESGADSAY
GVRRLPEMDQRAGANVHYTLLIACVLVAFFLGAILSGFLVSCYCSRSAAHRARRLGKDPE
ASLPHALSLRSLAKLNGLLDGQPKEDKLDVSTPKMYSSFIPNGRASPHLHTPGHQGLPLG
DPDLSLSQADGELSGLPTPDSTPELPIKNMKALRHHQYEKNQNCNNAKDNPKPGPSCSGS
SLGFMAVVGNSLTQQVFPYSHHHGSSLSNGAAHGAGASSTSLHLPEERKISNDERAAAAG
GGAGGGGAGGGGGGVPHHHHSQQSLPQTVVDVSALDELLKHIHEVSASGTGGIKVLTSTS
SSSLFPGPSSSSSGGHHHHHHHHHSHQGQTRTHHYNHSHHHSNHHNNNGGGGSGHHHQQQ
IPETESAPYYSTSTLPRDGLPKRLDTPAQNSASSFTTSSSSSSSSSNNPTSSTSVPSSSS
SSSSTPLQQQVIPERPGGSGVSVTRHHSQRHSLIKMGSGGGGAVPRHHSFNQRGAQHAHF
LARMNTNSSSNGPPAANEGVDANTSTNAESQRPSIASACLTRQHSYSEGPHVQRAAIIRR
TASLKPQVPPKPLFLPNTATSPVAEAGKYNY
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggccccgactgattggctgtcaccgtggcgaccgccgccactgatgctaatgctgctg
ctgctcgtcctctctttctgtttcctgtctgagtcggcctcgaccacgcccttccctaaa
gacctggagccaatcaacacggtcgactcggagcagtcgtaccagtatccagggtttcag
ggtttgcttcaggacaacgacacgctgcgtctaggcctggactttcagaggatgttacgc
atcaaccacatgttgtacatcgctgccagagatcacgtgtttgcagtgaacctgacgaca
gcttcagaggagttcgtacctcagctgaagctgacgtggaaatccaaagacgtcagcaag
tgcacggtcagagggaagaacagcgacgagtgttacaactatgttaaagtcctggtgccc
agaaacgacgagacactgttcgcctgtgganccaacgctttcaaccccacctgccgaaac
tacaggatgacctctttggagcaggttggcgaggaggtggtcggccaggctcggtgtcca
tttgagtctggtcagtccaatgtcggactgtttgcaggaggagacttctactcggccacc
atgacggacttcctggccagtgacgccgtcatctacaggagcctgggagatggacgacct
gtcctcaggaccgtcaagtacgactccaagtggctacgagagcctcatttcctgcacgcc
atcgactacggcaactacgtctactttttcctcagtgagatcgcagtggagtacaccacc
ctgggcaaggtggtgttttctcgggtcgcccgggtgtgtaagaacgataacggtggatct
cccagagtcctggagagatactggacctccttcctcaaggctcgtctcaactgttcggtt
cctggagattccttcttctacttcgacgttcttcagtctctcaccaacgtgctgcagatc
aaccagagacctgctgtggtcggggtcttcaccactcaggccaacagtatccccggctct
gcagtttgtgctttctacatggacgacatagagaaagtcttcaacgggaagtttaaggaa
cagcggaccagtgactcatcctggactccggtacctgacgagcaggttcccagaccgaga
cctggtatgtgtgctggtgacggtccagctgcagagtacaagtcgtcggttcagtttcca
gatgagacgctgacgttcatcaagtcgtatcctctgatggacgaagctgttccctccgtc
aatgaccggccctgcttcaccaggacctccagcaggtccaagctgacccagattgtggtg
gatgtctcggctggtccctacaaagaccggacggtgatgttcctgggctcagacgacggt
cgagtcctgaaagttttggccagcacgcatcccaacgacagcttcggatccaagctgctg
gaggacattgacgtttacaacccgtccaaatgtaacgttcagggtcaggaggacaggaga
gttctgggactggagctggataaggaccaccacgctttgtttgttgccttcaccagctgt
gtcatcagagtaccgctcagccgctgcacccaacacggagcctgtaaaaaagcctgtttg
gcttctcgtgacccatactgcatctggcttcggaccgggagttgtgccaacatggcgccg
ggtttcaaggcagggtttgaacaggatattgagggcgaccactcgtttcacccagacagc
tgccacgctgatgtcttggcgacgacacgaaaccaggagtctggagccgattctgcctac
ggtgtccgtcgtctcccggagatggaccagcgagccggcgctaacgtccactacaccctg
ctgatcgcctgtgtgctggtggctttcttcctgggtgccatcttgtctggcttcctggtg
tcgtgctactgcagccgcagtgccgcccaccgggcgaggcggctggggaaagaccctgag
gcgtcgctgccccacgctctgtcgctgcgatccctcgccaagctcaacgggctgctggac
ggacagcccaaggaggacaaactggacgtgtccactccaaagatgtacagctccttcatc
cccaacggccgggcctcacctcacctccacacccccggtcatcagggcctgccactggga
gaccctgacctcagcctctcccaggctgatggagagctgtccggcctgcccacgcccgac
tccacccccgagctccccatcaagaacatgaaggccctgcggcaccatcagtatgagaag
aaccagaactgcaacaacgccaaggacaaccccaagcctgggcccagctgctctggatcc
agtctgggtttcatggctgtcgtcgggaactctttgacccagcaggtgtttccctactct
catcaccatggcagcagtctgagcaacggggcagcacacggagcaggcgcttcttcaact
tcgttgcacctaccagaggagaggaagatctcgaatgacgagcgagcagcagcagcaggt
ggaggagcaggaggcggaggagcaggaggcggaggaggaggagtcccccatcatcaccac
tcccagcagtccctgcctcagacggtggtggatgtgtcggcgctggacgagctactcaaa
cacatccacgaggtcagtgcgtcagggactggaggcatcaaggtcctcacctccacctcc
tcgtcctccctgttccccgggccgtcctcatcctcttccggcgggcaccatcaccaccac
catcatcaccacagtcaccaaggccagacgcgcacccaccactacaaccacagccatcac
catagcaaccaccacaacaacaatggtggcggcggcagcggtcaccatcaccagcagcag
atccccgagactgaatcagctccgtactacagcacctccacgctgccgagggatggcctc
cccaaacgcctggacacacccgctcagaactccgcctcctctttcaccacctcctcctct
tcctcctcctcctcctccaacaaccccacctcctccacctccgtcccatcctcctcctct
tcttcctcctccactccgctccagcagcaggtgatcccagagagacccggaggtagcggt
gtctccgtgacgcgccaccactcccagcgccactccctgatcaagatgggcagcggcggc
ggcggtgctgtgcctcgccaccacagcttcaaccagcggggggcgcagcacgcacacttt
ctagcccggatgaacaccaacagcagcagcaacggcccccccgctgcgaacgagggggtc
gatgcaaacaccagtaccaacgctgagagccagcggccatcaattgccagcgcctgcctg
acacggcagcacagttacagcgaagggccacatgtgcagagggcggccatcatccggagg
acggcatcgctcaaaccccaagtcccgccaaaacccttgttcctgccaaacacagcgaca
tcaccggtagcagaggcagggaagtacaactactga
DBGET
integrated database retrieval system
