Lates calcarifer (barramundi perch): 108873908
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Entry
108873908 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108873908
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
108873908
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GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Dna2_Rift
Motif
Other DBs
NCBI-GeneID:
108873908
NCBI-ProteinID:
XP_018517774
UniProt:
A0AAJ7PCK4
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Position
LG9:complement(18835261..18850548)
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AA seq
396 aa
AA seq
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MMVHCAGCERPILDRFLLNVLDRAWHAKCVQCCDCNCNLTEKCFSRDGKLYCKMDFFRRF
GTKCAGCLQGISPNDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKEDYL
SSGAIKEVNLNSVSSCTDRSLSPDLADPIQDDIKETDNSTSSDKETNNIENEEQNSGTKR
RGPRTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRGPRRMRPLGGRLEDPDILGPGAYGYYGEYQGDYYGPGSNYDFFPHGP
PSSQAQSPAESPYILGSGPGAMEGSGHHPSDDQRFTDMISHAETPSPEPGLPSSLQPVPG
DAYGGGPSPPFSLASNSSYSAPMSHQGQEMGETTAW
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgatggtccactgtgccgggtgcgaacggcccatcctggaccggttcctcctcaacgta
ctggacagagcctggcacgccaagtgcgtccagtgctgtgactgcaactgcaacctcacc
gagaagtgtttctccagggacgggaagctctattgcaaaatggactttttcaggcggttt
ggcacaaagtgcgcgggctgtctgcagggaatctcgccaaacgacttggtccgcaaagcc
cgcagcaaggtgtttcatctcaactgcttcacctgcatggtgtgtaacaagcagctgtcc
acgggagaggagctctacgtgatagacgagaacaagtttgtttgcaaagaagattatttg
agctccggggccattaaggaagtcaacctgaactcagtgtcgtcgtgtacagacaggagt
ttatcgccggatctggcggacccaatacaggacgacataaaggagacggacaattcaacg
tcctcagataaggaaacgaacaatattgagaacgaggagcagaactcggggaccaaaagg
cgggggccccggaccaccatcaaggccaagcagctggaaacgttaaaggccgcgtttgtc
gccacgccgaaaccgacccggcacatccgagagcagctggcccaggaaacgggactaaac
atgcgggtcatccaggtttggttccagaaccgaagatccaaagagcgacggatgaagcag
ctgagtgctctcggggcccggcggcatgcctttttcaggggcccaaggaggatgaggccc
ctgggaggcaggctggaagatccagacattttggggcctggggcctatggttactatgga
gaataccaaggtgactattacggaccagggagtaactacgacttcttcccccatggccct
ccatcctcacaggctcagtctccagccgagtccccctacatcctgggctctgggcccgga
gccatggaggggtcaggccaccacccttcagatgaccaaaggttcacggacatgatctcc
catgcagaaacccccagtccggagccaggcttaccgagctccctgcagcctgtccctggg
gatgcatatgggggcggaccaagtcctcctttctccttggccagtaactccagttacagc
gctcctatgtcccaccaaggccaagagatgggagaaaccacagcctggtaa
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