Lates calcarifer (barramundi perch): 108873917
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Entry
108873917 CDS
T04895
Name
(RefSeq) peptidylprolyl isomerase domain and WD repeat-containing protein 1
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108873917
03110 Chaperones and folding catalysts [BR:
lcf03110
]
108873917
Enzymes [BR:
lcf01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
108873917
Spliceosome [BR:
lcf03041
]
Complex C
Other components
PPlases
108873917
Chaperones and folding catalysts [BR:
lcf03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
108873917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
WD40_Prp19
WD40
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_2nd
PEP5_VPS11_N
Beta-prop_WDR75_1st
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
108873917
NCBI-ProteinID:
XP_050928773
UniProt:
A0AAJ8B991
LinkDB
All DBs
Position
LG9:complement(18924089..18928981)
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AA seq
646 aa
AA seq
DB search
MIGAGRKYRNWKGQCGRFAAMAESENNVELKRKADETQDGDGNGEDDEWVGPMPSEATKA
KKRKVLEYERVYLDNLPSAAMYERSYMHRDVITHIVCSKTDFIITASQDGHVKFWKKKED
EGIEFVKHFRSHLGVIESIAVSAEGALFCSVGDDQAMKVFDVVNFDMINMLKLGFHPGQC
EWIYNPGDAISTVACSEKSTGKIFVYDGRGSNEPLHVFDKMHSSPLSQICLNPKFRVIVS
ADKAGMLEYWTGLPSEFKFPKHVHWEYKTDTDLYEFAKHKTYPTSLAFSPDGKKMATIAS
DRKVRIFRFLTGKLMRVFDESLTMFTELQQMRQQLPDMEFGRRMAVERELEKVDGIRLTN
IIFDETGHFVLYGTMLGIKVINVETNRCVRILGKLENIRVVQLSLFQGIAKAMQVAPTVE
MKASDNPALENVEPDPTIFCTAFKKNRFYMFSKREPEDTKSADSDRDIFNEKPSKEEVMA
ATQAEGPKRVSDSAIIHTTMGDIHIKLFPVECPKTVENFCVHSRNGYYNGHVFHRVIKGF
MIQTGDPTGTGMGGESIWGGEFEDEFHATLRHDRPYTLSMANAGPGTNGSQFFITVVPTP
WLDNKHTVFGRCTKGMEAVQRISNVKVNPKTDKPYEDISIINITIK
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgattggcgccgggcggaagtaccgtaattggaaaggacagtgcggaagatttgcagca
atggcggagtctgaaaacaatgtggaattaaaacgaaaagcagatgaaactcaggatgga
gatggaaatggggaagatgatgaatgggtcggacctatgccaagcgaagccacaaaagcc
aagaaaaggaaagttttggaatatgaacgtgtctacctggacaatctaccatcagctgcc
atgtatgaaaggagttacatgcacagagacgttatcacacacatagtatgctccaagaca
gacttcattatcacggccagtcaggacggccatgtcaaattctggaagaagaaagaggac
gaggggatagagtttgtcaaacactttcggagtcatctcggtgtgatagaaagcattgca
gtcagtgctgaaggggcgcttttctgttctgttggtgatgatcaggccatgaaagtattt
gatgttgtcaactttgacatgatcaatatgctgaagttgggctttcatccaggccagtgt
gagtggatctataatcccggggatgccatttccacagtggcctgctcagaaaaatccaca
ggaaagatctttgtctatgatggacggggaagcaacgagcccctccacgtctttgacaaa
atgcactcatcaccactgtcccaaatctgcctgaatcccaaatttagagtcatcgtttca
gctgacaaagcaggaatgctggaatactggactggcctcccaagtgaattcaaattcccc
aaacatgtgcattgggaatacaaaacagatacagacttgtatgaatttgcaaaacacaaa
acctatcccaccagcctggcattttctcctgatgggaagaaaatggcaaccatcgcctct
gacaggaaagtcaggatcttccgcttcctaacaggaaaactgatgagagtgtttgatgaa
tcgttaacgatgttcacagagttgcagcagatgaggcagcagctgcctgacatggagttt
gggagacgaatggcagtggagagagagctggagaaggtggatggcatccggttgacaaat
atcatctttgatgagaccggccactttgtgctctatgggaccatgctgggcattaaggtc
atcaatgtggaaaccaacagatgtgttcggatccttgggaagctggagaacatccgtgtg
gtccagctgagtttgttccaggggattgcaaaggccatgcaagtagcccccactgtggag
atgaaggcatctgacaaccctgccttagagaacgtagagcccgaccccaccatattctgc
actgcatttaagaagaaccgcttttacatgttctcaaaaagagaaccagaggatacaaag
agcgctgactcagacagagacatctttaacgagaagccttcgaaggaggaggtgatggct
gcgacgcaggccgagggccccaagagagtgtctgacagtgccatcatccacaccaccatg
ggagacatccacatcaagctcttccctgtagaatgccccaaaactgtggagaacttctgt
gttcacagcaggaatggctactataatggccatgtattccacagagtaatcaagggcttt
atgattcagacgggagaccccacaggcacgggcatgggaggagagagcatctggggagga
gagtttgaggacgaattccacgccacgctgagacacgaccgcccgtacacgctcagtatg
gcaaacgcaggccccggcaccaacggctcacagttcttcatcactgttgttcccactcct
tggcttgacaacaagcacactgtgtttggaaggtgtacaaaaggcatggaagctgtccag
aggatctccaatgtcaaagttaaccccaagactgacaaaccgtacgaagacatcagcatc
atcaacatcaccattaaatga
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