Lates calcarifer (barramundi perch): 108873942
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Entry
108873942 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: spliceosome-associated protein CWC27 homolog
KO
K12737
peptidyl-prolyl cis-trans isomerase SDCCAG10 [EC:
5.2.1.8
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108873942
03110 Chaperones and folding catalysts [BR:
lcf03110
]
108873942
Enzymes [BR:
lcf01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
108873942
Spliceosome [BR:
lcf03041
]
Complex C
Other components
PPlases
108873942
Chaperones and folding catalysts [BR:
lcf03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
108873942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
108873942
NCBI-ProteinID:
XP_018517792
UniProt:
A0AAJ7LC29
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Position
LG9:18929308..18958720
Genome browser
AA seq
481 aa
AA seq
DB search
MSNIYIQEPPTNGKVLLKTSAGDIDIELWSKEAPKACRNFVQLCMEGYYDGTIFHRVVPE
FIVQGGDPTGTGTGGESIYGRPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRA
DELNNKHTIFAKVTGDTVYNMLRLADVECDGEERPLNPHKIRIAEVLHSPFDDIVPREIK
KGKKEKDKEEGKKSQSKATKNFSLLSFGEEAEEEEEMVNQVSQTLKGKSKSSHDLLKDDP
RLSSVPAVDKKKKKGTSGDAADTDDDEADDDVEDDMEEDEEYDSDKKEKMRELISKKLKK
EKGTEKMTEPSEEERGKKTSRSDELRKEARQLKKELQAIKQRKEESSKPVVDEVKEVDKK
PNSEAVAEYLEGRKKYEELRKQKLKKGSNREEQTLALLNRFKSKLSSAITDAPEDDVEDL
AEDDDKGWMGHVLQFDEQTRKVKDANMQDEDTFEIYDPRNPVNKRRREESKKIMKEKKAK
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatatttacattcaagagcctccaacaaacggaaaggtcctgttgaagacctcg
gcaggtgatattgacattgagttgtggtccaaggaggctcctaaagcatgcaggaacttt
gtgcagctatgcatggaaggttactatgacggcacaatatttcacagagtggtgcctgaa
ttcattgttcaaggtggagatcccactgggacagggacaggtggagagtccatctatggc
cggccattcaaggatgaatttcactccagattgcgcttcaatcgaagaggtttggttgcc
atggcaaatgctgggccacatgataatggcagtcagtttttcttcaccttgggacgcgca
gatgagctcaacaacaaacacactatattcgccaaggtcacaggagacacagtttataat
atgctcagattagccgacgttgaatgtgatggagaggaaagacctctgaatccccacaaa
ataagaatcgcggaggtgcttcactctccctttgatgacattgtaccccgtgaaataaag
aaaggcaaaaaggaaaaagacaaagaggagggaaagaaatcacagtccaaagccacaaag
aacttcagtctgttgtcatttggagaagaagctgaagaggaagaggagatggtgaatcaa
gtcagtcagacattgaagggaaaaagcaaaagcagccatgacctcctgaaagatgatcca
aggctgagctctgttccagcagttgataagaagaaaaagaaagggacatctggagatgca
gctgatacggacgatgatgaggccgatgatgatgttgaagacgacatggaagaagatgaa
gaatatgactcagataagaaagagaagatgagagagctcatcagtaaaaagctaaagaaa
gaaaaaggcacagagaaaatgacggagcccagtgaggaagagcgagggaaaaagaccagc
cgcagtgatgaattacggaaagaggcgcggcagttgaagaaggagctacaggccataaag
caaaggaaagaagaaagttcaaaacctgtagtagatgaagtcaaggaagtggataaaaag
ccaaacagtgaggcagtggctgagtacctggagggaagaaagaagtacgaagagctcagg
aaacaaaaactgaagaaaggctcaaacagagaagaacagacactggccctcctcaatcgc
ttcaagtccaagctgtcatcggctatcactgatgctccagaggatgacgtggaggacctg
gcagaagatgatgacaaaggatggatgggccatgttctgcagtttgatgagcaaaccaga
aaagtcaaggatgccaacatgcaggacgaggacacttttgagatctacgacccgcgcaac
cccgtcaataaacgacggagagaggagagcaagaagatcatgaaggagaaaaaggccaag
aggtga
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