Lates calcarifer (barramundi perch): 108873971
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Entry
108873971 CDS
T04895
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 6
KO
K08621
a disintegrin and metalloproteinase with thrombospondin motifs 6 [EC:3.4.24.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108873971
Peptidases and inhibitors [BR:
lcf01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
108873971
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
Reprolysin
Pep_M12B_propep
TSP_1
ADAMTS_CR_2
Reprolysin_5
ADAMTS_CR_3
Reprolysin_3
Reprolysin_2
PLAC
TSP1_spondin
Reprolysin_4
TSP1_CCN
Peptidase_M57
Peptidase_M66
DAGK_cat
Motif
Other DBs
NCBI-GeneID:
108873971
NCBI-ProteinID:
XP_018517802
UniProt:
A0A4W6CDL9
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All DBs
Position
LG9:complement(18973399..19039633)
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AA seq
1132 aa
AA seq
DB search
MEILWKTLTWTLSLVVMAASEFQSVNRLSHNSQEEFLSYLQHYQLTVPVRVDENGEFLSY
TVKQHRPGRRRRGAVDPIMGPVPSLDPDPPESRLFYRLSAYGKHFHLNLTLNPHLVSKHF
TVEYWGKEGLEWRHNMVDNCHYIGFLRNQHSTTRVALSNCKGLHGVITTEEEQYLIEPLK
NISSTTSSEWNLEEAQQHVIYKMSAIPSPQEHSQEFSCGISDLIKTSAPCQFSTPYPVQT
SPVPQNDSERLNSTHRQRRSVSTERFVETLVVADKMMVGYHGRKDIEHYILSVMNIVAKL
YRDASLGNVVNIIVTRLIVLTEDQPNLEINHHADKSLDSFCKWQKSILSHHSDGNSIPEN
GMAHHDNAVLITRYDICTYKNKPCGTLGLASVAGMCEPERSCSINEDIGLSSAFTIAHEI
GHNFGMNHDGIGNSCGTKGHETAKLMAAHITANTNPFSWSACSKDYITSFLDSGRGTCLD
NEPLKRDFLYPTVAPGQVYDADEQCRFQYGASSRQCKYGEVCRELWCLSKSNRCVTNSIP
AAEGTLCQTGSIEKGWCYQGECVAFGTWPQSVDGGWGPWSLWGECSRTCGGGVSSSMRHC
DSPAPSGGGKYCLGERKRYRSCNTDACPVGSRDFREKQCADFDSMPFRGKYYNWKPYTGG
GVKPCALNCLAEGYNFYTERSPAVIDGTRCQADSLDICINGECKHVGCDNILGSDAKEDR
CRVCGGDGSTCEATEGLFNESLPRGGYMEVVQIPKGSVHIEIKEVAMSKNYIALKSEEDD
YYINGAWTIDWPRKFDIAGTAFHYKRPSDEPESLEALGATTENLVVMVLLQEQNMGIRYK
FNVPIQRTGSGDNEVGFSWHHLPWSECSATCAGGSQKQEVVCKRLDDNSVVQNSYCDPDS
KPPENQRDCNTEPCPPEWFIGDWSECGKTCDGGIRTRTVLCIRKIGPAEEETLEDTHCLT
HRPIERESCNNQSCPPKWVTLDWSECTPKCGPGYKHRIALCKSSDLTKTFPPAQCPSHNK
PPVRIRCSLGRCPPPRWIPGEWGQCSAQCGLGQQMRTVQCLSYTGQPSNECAESLRPTNM
QQCESKCDATPISNGDECKDVNKVAYCPLVLKFKFCSRAYFRQMCCKTCQGH
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggaaattttgtggaagacgctcacttggacactgagcctggtggtgatggctgcttct
gaatttcaaagcgtcaacagactttcacacaactctcaagaggagttcctgtcctacctg
cagcactaccagttgactgtcccggtgcgggtagacgaaaacggagagttcctgagctac
actgtgaagcaacaccggccgggccgacggagacggggggccgtggaccccataatggga
ccggtgccctcgttggacccggaccctccagagtcccggctgttctacagactgtcagcc
tacggaaagcactttcacttaaacctgacactcaacccccacctggtgtcgaaacatttt
acagtggagtactggggcaaagaagggctggagtggcgtcataacatggtagataactgt
cactatataggattcctgcgaaatcagcacagcacgaccagagtggctctcagcaactgc
aagggcctgcatggtgttataacaacagaggaagaacagtatttaatagagccattaaag
aacatatcctccaccacctccagtgaatggaacctggaagaagcacagcaacatgttatt
tataaaatgtctgccattccctcaccgcaagagcatagccaggagttcagctgtggcatt
tcagacctcatcaaaaccagtgcaccttgccagtttagcacaccttaccctgtccaaacg
tcccctgttccccaaaatgacagcgagcggttgaatagcacccacagacagagacgctct
gtcagcactgagcgctttgtggagacgctagttgtcgccgataaaatgatggtcggttac
cacggacgcaaagacattgagcactacatcttatctgtaatgaatattgttgccaaactt
taccgtgatgccagtctaggaaatgttgtgaacattattgtaacccggctgattgttctg
actgaagatcagcctaacctggagattaaccatcatgctgacaagtctctggacagtttc
tgcaaatggcagaagtccatcttgtctcatcacagtgatggcaacagcattcctgaaaat
gggatggctcatcatgacaacgctgtcctaatcacccgatatgacatctgcacctacaag
aacaaaccctgtggtaccttaggcttggcctcggtggctggaatgtgtgagccggagagg
agctgcagcatcaatgaagacatcggcctcagttctgctttcaccattgcgcacgagatc
ggccacaattttgggatgaaccatgatgggattgggaattcctgtggcaccaaaggccac
gagacagccaaactgatggccgctcatataacagccaacaccaaccctttctcttggtct
gcctgcagcaaagactacatcaccagctttcttgactcaggtcgggggacgtgtctggac
aatgaacctctgaaacgagacttcctgtacccaacagtggccccggggcaggtgtacgat
gcagatgagcagtgtcgcttccagtacggagcctcctcacgccagtgcaagtatggggaa
gtgtgtagagagctctggtgccttagcaaaagcaaccgctgtgtaacaaacagtattcct
gcggcagaggggactctgtgccagactggcagcattgagaaggggtggtgctaccagggg
gagtgcgttgcattcggaacctggcctcagagtgtggacggaggctgggggccctggtcc
ctgtggggggagtgcagcaggacctgtgggggcggtgtatcctcctccatgaggcactgt
gacagcccagctccatccggaggaggcaagtactgtcttggagagaggaaacgctacaga
tcctgtaacactgacgcctgccctgtaggatcccgtgatttccgagagaagcagtgtgct
gattttgacagcatgcctttccgtgggaaatactacaactggaagccttacactggtggt
ggcgtgaagccctgtgcactgaactgcttggcagagggctacaacttctacacagaacgc
tctcctgcagtcatagatggcacccgatgtcaggctgactctctggacatttgcatcaat
ggcgagtgtaagcacgtgggctgcgacaacatcctgggatctgatgctaaagaagatcga
tgccgcgtgtgtggaggggatggcagcacctgcgaggccacggagggactcttcaatgag
tctctgcccagaggaggctacatggaggtggttcagatcccaaaaggatcggttcacatc
gagattaaagaagttgccatgtccaagaattatattgctttgaaatctgaagaggatgat
tattacatcaacggagcgtggaccattgactggcccagaaagtttgacattgcagggacg
gccttccactacaagagaccctctgatgaaccagagtctttagaggccctgggagctacc
actgaaaacctggttgtcatggtcctccttcaggaacagaacatgggaatacgctacaaa
ttcaacgtgcccatccagcgcacgggaagtggcgacaacgaggtgggcttctcctggcac
cacctgccctggtctgaatgctcagctacctgcgctggaggttcccaaaagcaggaggtg
gtgtgtaagaggttggacgacaactcggtggtgcagaacagctactgtgacccagacagc
aaacccccggagaaccagagggactgcaacaccgagccgtgtcccccagagtggtttatt
ggtgactggtcagagtgtgggaagacatgtgatggtgggataaggacgaggacagtcttg
tgtatcaggaagattggccctgctgaggaggagacactggaggacacccactgtctgact
caccgacctatcgaacgcgagtcctgcaacaaccagtcctgcccgccaaagtgggtcact
ctggattggtccgagtgcacacctaaatgtggccccgggtataagcaccgcatcgccttg
tgtaagagcagtgacctgacaaagaccttcccgcccgcccaatgcccgagccacaacaaa
cctccggtccgaatccgctgcagtttagggcgctgtcctcctcctcgctggatccctggt
gaatggggacagtgttcggcgcagtgcggcctgggccaacagatgaggacggtgcagtgt
ctgtcgtacacaggtcagccgtctaatgagtgcgcagagtccctccgccccaccaacatg
cagcagtgcgagagcaagtgtgatgccacccccatctctaatggcgacgaatgcaaagat
gtaaacaaagtggcctactgcccgctggttctgaagttcaagttctgcagccgagcgtac
ttcagacagatgtgctgcaagacctgccaggggcactga
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