Lates calcarifer (barramundi perch): 108873972
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Entry
108873972 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3
KO
K09374
LIM homeobox protein 3/4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108873972
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
108873972
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GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Furin-like_2
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
108873972
NCBI-ProteinID:
XP_050928683
UniProt:
A0AAJ8B938
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Position
LG9:12945343..12957875
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AA seq
400 aa
AA seq
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MLLEHPGSSCQNTGNFPRYSSGQEIPVCAGCSQHIVDRFILKVLDRHWHSKCLKCSDCQA
QLADKCFSRGDSVYCKEDFFKRFGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKR
QLATGDEYYLMEDSRLVCKADYETAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPA
RHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRQRWGQYFRNMKRSRGSSKSDKD
SIQEEGMDSDAEVSFTDEPPMSELGHTNGIYSSLSESSPAMGGRQGGNNHSSFPLEHSVL
PSQDQFHDIRSNSPYGLPQSPGSLQALPRHQPLISSLVYPDSGLSIMTQGSGPGINPAVR
VSMAPANGPSSDLSTGSSGGYPDFPASPASWLDEVDHGQF
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttgagcacccggggtcaagttgtcaaaacaccggaaatttccctcggtacagt
tcaggccaagaaatcccagtctgtgcaggctgcagtcaacacatcgtcgaccgctttatc
ctcaaagtactggatcgccactggcacagcaagtgcctgaaatgcagcgactgccaggcg
cagctggcggacaagtgcttcagcaggggcgacagcgtttactgcaaagaagatttcttc
aagagattcgggaccaaatgcgcagcctgtcagcaggggataccgcccacacaggtggtg
aggagagcgcaggacttcgtctaccacctgcactgttttgcctgcatcgtgtgcaagagg
caattggccacaggtgacgagtactacctgatggaggacagcaggctggtgtgtaaggcc
gactatgagaccgccaaacagagagaagcagactcaactgcaaaaaggccacgaacaacc
atcactgctaaacagctggaaacgctgaagaacgcttacaacaactctcccaaacctgcc
cgccacgttcgagagcagctatcatcagagacgggcctggacatgcgggttgtgcaggtt
tggtttcagaacagacgagctaaagagaaaaggctcaagaaagacgctggtcggcagagg
tggggccagtacttccgcaacatgaagcggtcacggggaagctccaaatccgacaaggac
agcatccaggaggagggcatggacagtgatgcggaggtgtccttcacagatgaaccaccc
atgtcagagctcggccataccaatggcatctacagcagcctcagtgagtcctctccagcc
atggggggccgccaaggaggcaacaaccatagctccttccccttggagcacagtgtcctg
ccctctcaagaccagttccatgacatccgctccaacagcccgtacggtctccctcagtca
ccagggtcacttcaggcactgcccagacatcagcctctcatctccagcctggtctaccct
gactctggcctttccatcatgacccagggcagcgggcctgggatcaaccctgcagtgagg
gtctccatggcaccagccaacggcccaagctcagacctctccacaggaagcagcggagga
tacccagactttccagccagtcctgcctcttggctagatgaagtggaccatgggcagttt
tga
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